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8 protocols using spark 10

1

Benzofuran Derivatives Affect Cell Proliferation

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We used colorimetric MTT assays to study the effects of benzofuran derivatives on cell proliferation. Cells (1 × 104 cells/well) were seeded onto a 96-well plate and treated with various concentrations of the compounds for 24 h. MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide, Amresco, OH, USA) was dissolved in PBS at 5 mg/ml then added to the well plate and incubated for 4 h at 37 °C. The supernatant was suctioned, and formazan crystals were dissolved in 100 μl DMSO. Optical density was measured using a microplate reader (SPARK10, TECAN, Switzerland) at 570 nm and cell viability was expressed as the proportion of untreated cells.
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2

Dual Luciferase Reporter Assay for Wnt Signaling

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For reporter assays, cells were seeded on a 96-well plate and transfected with 50 ng firefly reporter, 5 ng renilla control, and 10 ng of the plasmid of interest in each well. Where indicated, 6 h after transfection, cells were treated with control, Wnt3a (standard dilution 1:5) or R-spondin 3 conditioned media (standard dilution 1:1000), or a combination of both (indicated as W/R). The dual luciferase assay was conducted as described previously (58 (link)) with few changes. Briefly, after overnight incubation, cells were lysed in passive lysis buffer (25 mM Tris, 2 mM DTT, 2 mM EDTA, 10% (v/v) glycerol, 1% (v/v) Triton X-100, (pH 7.8)) and agitated for 10 min. Lysates were transferred to a flat bottomed 96-well luminescence assay plate. Firefly luciferase buffer (200 μM D-luciferin in 200 mM Tris–HCl, 15 mM MgSO4, 100 μM EDTA, 1 mM ATP, 25 mM DTT, pH 8.0) was added to each well and the plate was incubated for 2 min at room temperature. Luciferase activity was measured using Spark10 (Tecan) or a SpectraMax iD3 Multi-Mode Microplate Reader (Molecular Devices). Next, Renilla luciferase buffer (4 μM coelenterazine-h in 500 mM NaCl, 500 mM Na2SO4, 10 mM NaOAc, 15 mM EDTA, 25 mM sodium pyrophosphate, 50 μM phenyl-benzothiazole, pH 5.0) was added to the plate and luminescence was measured immediately. Data were normalized to the Renilla control values, performed in triplicate.
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3

Mitochondrial Toxicity Quantification

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Assessment of mitochondrial toxicity was performed using the Mitochondrial ToxGlo Assay to quantify cellular ATP levels according to the manufacturers' instructions (Promega, Germany). Briefly, for each condition a cell suspension containing 200,000 cells per ml were prepared from chopped tissue sections and supernatant. Fifty microliter cell suspension were incubated with 20 μl of cytotoxic reagent in 96-well plates for 30 min at 37°C. Subsequently, 100 μl ATPase reagent was added and plates were shaken for 1 min, before measuring the luminescence signal using a plate reader (Spark 10, Tecan).
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4

Cell Viability Measurement by MTS Assay

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The viability of LSCC cells was measured by MTS Assay Kit (Sigma, St. Louis, MO, USA). 2 × 103 cells were seeded in 96-well plates, then 20 μl MTS Assay Kit was added to each well and incubated for 2 h at 37 °C. The absorbance was detected using Spark® multimode microplate reader (Mod: SPARK 10 M, TECAN, Switzerland) at a wavelength of 490 nm.
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5

Characterization of Modified Fibers

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For the imaging of the fibers, scanning electron microscopy (SEM) was performed. SEM images were taken on a JSM-6610LV from Jeol (Freising, Germany) operated with 2 kV. Attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopy characterization of the fibers was performed with the Fourier transformation IR spectrometer Tensor 27 from Bruker Optik GmbH (Ettlingen, Germany). The spectra were recorded in a range of 400 cm−1 up to 4,000 cm−1. Fluorescence spectroscopy measurements were carried out using the plate reader Spark 10 from Tecan. Zeta potential titration curves of differently modified fibers were measured with the SurPass™ 3 from Anton Paar (Graz, Austria) using a gap measuring cell with two stamps (20 × 10 mm). For each measurement, an area of 10 × 10 mm2 of one stamp was covered with the fibers by attaching them to double-sided adhesive tape. The fibers were stacked parallel to each other and vertically to the flow direction of the electrolyte (KCl, 0.01 M). The second stamp was covered with a glass slide (10 × 10 mm). After adjusting the pH value with aqueous KOH (0.05 M), the curves were recorded by proceeding from basic to acidic pH values by addition of aqueous HCl (0.05 M). All chemicals had analytical grade and were dissolved in ultrapure water. At each pH value, the zeta potential was measured three times with the SurPass™ 3.
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6

Cholinesterase Activity Assay in Brain Regions

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Total ChE activity was determined using the Ellman method by adding 5 µL of piriform cortex and amygdala sample to 0.22 mM 5,5′-dithiobis-2-nitrobenzoic acid (DTNB, Sigma Aldrich, St-Quentin Falavier, France) in phosphate buffer (pH 7.4). In parallel, 0.1 mM ethopropazine hydrochloride (Sigma Aldrich) was added for AChE-specific activity analyses. After a 15-min baseline reading to account for thiols present in the samples, 1 mM acetylthiocholine (Sigma Aldrich) was added and the reaction between thiocholine and DTNB was monitored for 30 min at 412 nm and at 25 °C in a microplate reader (Spark 10, Tecan). All samples were assayed in duplicate. Activities of the piriform cortex and amygdala samples were normalized to total protein concentration for each sample. The final results were expressed as percentages of average CTL activity.
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7

Fluorimetric Glutathione Assay Protocol

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Cells were washed in PBS, detached by trypsin and washed with PBS. Cells were then lysed and assayed in accordance with the protocol for Fluorimetric Glutathione Assay kit (CS1020, Sigma). GSH levels in the cells were determined by use of a GSH standard curve, and all samples were measured in triplicate. The readout was performed using Tecan Spark 10 microplate reader, and the data was analysed using GraphPad Prism 7.
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8

Quantifying α-Synuclein Aggregates in Hippocampal Slices

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The PROTEOSTAT® Protein aggregation assay (Enzo Life Sciences, Germany) was used to measure α-synuclein aggregates in solution as described by the manufacturer's instructions. Briefly, hippocampal slices supernatant was used to detected protein aggregates using 0.5 μl of reagent added to 1 ml of assay buffer provided with the kit and added to supernatant solutions concentrated through ultrafiltration (0.22 μm Millipak filters, Millipore) and collected from the different culture conditions after 35 DIV. The luminescence signals were then measured using a plate reader (Spark 10, Tecan).
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