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Anti tubulin dm1a

Manufactured by Merck Group
Sourced in United States, United Kingdom

Anti-tubulin (DM1A) is a monoclonal antibody used in laboratory research. The core function of this product is to specifically bind to and detect the presence of the tubulin protein, which is a key structural component of the cytoskeleton in eukaryotic cells.

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12 protocols using anti tubulin dm1a

1

BRF1/2 Immunoprecipitation and Detection

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Lysates (without crosslinking) and beads were prepared as described in the iCLIP procedure. Immunoprecipitation was performed with 500mg protein as described in the iCLIP procedure. Immunoblotting was performed by standard procedures. 50µg protein of crude lysate was loaded and 10% of the unbound fraction or IP, respectively. Antibodies for immunoblotting were: anti-BRF1/2 (Cell Signaling), anti-GFP (clone B2, Santa Cruz), anti-Tubulin (DM1A, Sigma).
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2

Western Blot Analysis of Protein Expression

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Proteins were transferred to 0.45 μm Immobilon-P PVDF membrane (Millipore, Burlington, MA) in transfer buffer (25 mM Tris, 200 mM Glycine, 20% methanol) for 75 min at 500 mA at 4°C. The membranes were blocked with blotto (2.5% nonfat dry milk, 0.5% BSA, 0.5% NP-40, in TBST) for 30 min at room temperature and then incubated with rabbit anti-ZLD (1:750) (Harrison et al. 2010 (link)), or anti-Tubulin (DM1A, 1:5,000) (Sigma, St. Louis, MO), overnight at 4°C. The secondary incubation was performed with goat antirabbit IgG-HRP conjugate (1:3,000) (Bio-Rad, Hercules, CA) or antimouse IgG-HRP conjugate (1:3,000) (Bio-Rad) for 1 h at room temperature. Blots were treated with SuperSignal West Pico PLUS chemiluminescent substrate (Thermo Fisher Scientific, Waltham, MA) and visualized using the Azure Biosystems c600 or Kodak/Carestream BioMax Film (VWR, Radnor, PA).
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3

Immunofluorescence and Western Blotting Protocol

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Where indicated in the figure legends and on the figures, aphidicolin (2 μg/ml; Sigma) or nocodazole (50 ng/ml; Sigma) was diluted in fresh medium and added to cells. The following antibodies were from commercial sources: anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (ab9485; Abcam), anti-tubulin (DM 1A; Sigma), anti-FLAG (PA1-984B, Thermo), anti-FLAG (M2; Sigma), anti-HA (HA.11, BioLegend), anti-cytomegalovirus for IE1 (ab30924; Abcam), and anti-cytomegalovirus for IE1 and IE2 (MAB810R; Millipore). Monoclonal antibodies against IE1 (1B12) and IE2 (3H9) were described previously (70 (link)). Infrared (IR) dye 680- and 800-conjugated secondary antibodies (Li-Cor) were used for Western blotting. Alexa Fluor 488-conjugated secondary antibody (catalog no. A-11017; Invitrogen) and Alexa Fluor 594-conjugated secondary antibody (catalog no. A-11020; Invitrogen) were used for immunofluorescence.
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4

Western Blot Protein Detection Protocol

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Straight lysates from cells were made in 6 wells by addition of 200 µl of 1× Laemmli buffer. All protein samples were run on SDS-PAGE gels and blotted on 22 µm pore size nitrocellulose membranes (Santa Cruz). V5 stainings were performed using V5 tag monoclonal antibodies (Invitrogen, R960-25; 1:1,000), tGFP staining with rabbit anti TurboGFP (Invitrogen, PA5-22688; 1:1,000), IDO1 was visualized with rabbit anti-IDO D5J4E (Cell Signaling, 86630, 1:1,000) and tubulin with anti-tubulin (DM1A, Sigma, 1:10,000).
Subsequent stainings were performed with IRDye 680RD donkey anti-mouse (LI-COR, 926-68072, 1:10,000) and IRDye 800CW goat anti-rabbit (LI-COR, 926-32211, 1:10,000) secondary antibodies. Visualization was performed by use of an Odyssey infrared scanning device (LI-COR).
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5

Western Blot Analysis of Developmental Regulators

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Proteins were separated on denaturing polyacramide gels before transfer to a 0.45 μm Immobilon-P PVDF membrane (Millipore) in transfer buffer (25 mM Tris, 200 mM Glycine, 20% methanol) for 60 min 75 min for Zld) at 500mA at 4°C. The membranes were blocked with BLOTTO (2.5% non-fat dry milk, 0.5% BSA, 0.5% NP-40, in TBST) for 30 min at room temperature and then incubated with anti-Zld (1:750)78 (link), anti-Grh (1:1000)78 (link), anti-Twi (1:1000)79 , anti-HA-peroxidase (1:500) (clone 3F10, Roche), or anti-Tubulin (DM1A, 1:5000) (Sigma), overnight at 4°C. The secondary incubation was performed with goat anti-rabbit IgG-HRP conjugate (1:3000) or goat anti-mouse IgG-HRP conjugate (1:3000) (Bio-Rad) for 1 hr at room temperature. Blots were treated with SuperSignal West Pico PLUS chemiluminescent substrate (Thermo Fisher Scientific) and visualized using the Azure Biosystems c600 or Kodak/Carestream BioMax Film (VWR).
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6

Western Blot Protein Detection Protocol

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Proteins were transferred to 0.45 μm Immobilon-P PVDF membrane (Millipore, Burlington, MA) in transfer buffer (25 mM Tris, 200 mM Glycine, 20% methanol) for 60 min (75 min for Zld) at 500mA at 4°C. The membranes were blocked with blotto (2.5% non-fat dry milk, 0.5% BSA, 0.5% NP-40, in TBST) for 30 min at room temperature and then incubated with anti-GFP (1:2000, #ab290) (Abcam, Cambridge, United Kingdom) anti-Zld (1:750) (Harrison et al., 2010 (link)), or anti-tubulin (DM1A, 1:5000) (Sigma, St. Louis, MO), overnight at 4°C. The secondary incubation was performed with goat anti-rabbit IgG-HRP conjugate (1:3000) (Bio-Rad, Hercules, CA) or anti-mouse IgG-HRP conjugate (1:3000) (Bio-Rad) for 1 hr at room temperature. Blots were treated with SuperSignal West Pico PLUS chemiluminescent substrate (Thermo Fisher Scientific, Waltham, MA) and visualized using the Azure Biosystems c600 or Kodak/Carestream BioMax Film (VWR, Radnor, PA).
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7

Immunofluorescence Analysis of Cytoskeletal Proteins

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U2OS cells plated on fibronectin-coated (15μg/ml) coverslip were either pre-extracted in 0.25% paraformaldehyde, PFA (16% stock solution Electron Microscopy Science) and 0.05% triton in cytoskeleton buffer (CB; 10 mM MES 6.1, 138 mM KCl, 3mM MgCl, 2 mM EGTA) for 1 min at 37°C, and fixed in 4% PFA in CB for 20 min, or fixed in 4% PFA in CB for 20 min at 37°C. After fixation, coverslips were permeabilized in 0.5% Triton X-100 in CB for 5 min, free aldehydes were reacted with 100 mM glycine, washed in TBS, and blocked in blocking solution (2% BSA TBS-T) for 1 hr. Cells were incubated with primary antibodies (anti-MARK2 (1:250, Abcam), anti-tubulin DM1A (1:500, Sigma), anti-GM130 (1:500 Cell Signaling), anti-S19-PMRLC (1:200, Cell Signaling), anti-myosin IIA (1:400; Sigma Aldrich,), anti-paxillin (1:500; BD Biosciences, San Jose, CA) or anti-MYPT1 (1:250, Abcam) diluted in blocking solution, washed 3 times 10 min each in TBS-T and then incubated with fluorophore-conjugated secondary antibodies (1:400; Jackson ImmunoResearch Laboratories) and Alexa Fluor 488 or 568 phalloidin (1:400; Invitrogen), washed again and mounted on slides with mounting media (Dako, Pathology Products, Carpinteria, CA), or in TBS supplemented with n-propylgalate for TIRF imaging.
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8

Immunoblotting Antibody Reagents

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The following antibodies were used: anti-Flag (M2, Sigma-Aldrich, Oakville, AB, Canada), anti-Myc (9E10, Santa Cruz Biotechnology, Dullas, TX, USA), anti-HA (F-7, Santa Cruz Biotechnology, Dullas, TX, USA), anti-tubulin (DM1A, Sigma, Oakville, AB, Canada), anti-PARP (436400, Invitrogen, New York, NY, USA), anti-mouse IgG HRP (85-18-8817-31, ebioscience, San Diego, CA, USA), anti-rabbit IgG HRP (85-18-8816-31, ebioscience, San Diego, CA, USA) and normal mouse IgG (sc-2025, Santa Cruz Biotechnology, Dullas, TX, USA). Protein A/G PLUS Agarose (sc-2003) was purchased from Santa Cruz Biotechnology, Dullas, TX, USA, and Ni-NTA beads (30210) from Qiagen, Duesseldorf, Germany. Cycloheximide (C7698-5G) was purchased from Sigma-Aldrich, Oakville, AB, Canada, and MG132 (CAS 133407-82-6) was from Merck, Darmstadt, Germany.
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9

Immunofluorescent Labeling of Cytoskeletal Structures

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Cells were fixed and permeabilised with 3% paraformaldehyde (Sigma) containing 0.25% Triton X-100 (Sigma) and 0.05% glutaraldehyde (Sigma) for 15 min, before being washed in PBS (Lonza). Autofluorescence was quenched using 0.01% sodium tetrahydroborate (Sigma) in PBS. Cells were incubated with anti-tubulin (DM1A, Sigma) antibody, at 1∶500 dilution, followed by secondary antibodies conjugated to DyLight 488, 594 or 649 (Jackson ImmunoResearch Laboratories, Suffolk, UK). For actin, Texas-Red-, FITC- or Alexa-Fluor-633-labelled phalloidin (Invitrogen) was added together with the secondary antibody. For the EB1 antibody (1A11/4, Santa Cruz Biotechnology), cells were fixed in −20°C methanol for 5 min, before being rehydrated in PBS and stained using anti-tubulin antibodies (as above). For the experiments involving nocodazole (Sigma) and Cell-Tak, cells were spread on glass-bottomed dishes in the presence of 10 or 4 µM nocodazole or DMSO (control) and Cell-Tak, respectively, for 1 h prior to fixation. Cells were then imaged using an oil-immersed 100× objective, with 1.35 numerical aperture, on an inverted microscope (IX71; Olympus) controlled by a Deltavision system (Applied Precision, Washington, USA). Images were captured using a Coolsnap HQ CCD camera (Princeton Instruments, Lurgan, UK).
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10

Polyclonal SANBR Antibody Production

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The polyclonal SANBR antibody was produced by immunizing rabbits with the C-terminal SANBR peptide (RSKSRFGQGRPA) and isolating reactive antibodies from sera (Covance). Antibodies for flow cytometry include: anti-IgG1-APC (X56, BD Pharmingen), anti-IgA-FITC (C10-3, BD Pharmingen). Antibodies for immunoblot include: anti-AID (53 (link)), anti-tubulin (DM1A, Sigma), anti-penta-His (34660, Qiagen), anti-GFP-HRP (B-2, Santa Cruz), anti-Flag (M2, Sigma). Antibodies for chromatin immunoprecipitation (ChIP) include: anti-H3 (ab1791, Abcam) and rabbit IgG (I5006, Sigma).
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