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7 protocols using stim1

1

Cardiac Protein Expression Analysis

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All protein samples were extracted from mice hearts. Protein concentrations were determined using a Bradford assay with bovine serum albumin (BSA) as a standard. To determine the protein expression of STIM1 (BD Biosciences, CA, USA), STIM2 (Cell Signaling Technology, MA, USA), TRPC1, TRPC3, TRPC4, and TRPC6 (Alomone Labs, Jerusalem, Israel), pNFATc4 (rabbit anti-mouse polyclonal antibody raised against short amino acid sequence containing Ser 168 and 170 dually phosphorylated NFATc4 of human origin, Santa Cruz Biotechnology, TX, USA), NFATc4 (rabbit anti-mouse polyclonal antibody raised against amino acids 125–198 of NFATc4 human origin, Santa Cruz Biotechnology, TX, USA), samples (50 μg) were run on 6% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE), transferred to polyvinylidene fluoride (PVDF) membranes, and rocked at 4°C for 1 h in blocking buffer (0.1% Tween 20 and 1% BSA in Tris-buffered saline). An enhanced chemiluminescence (ECL)-detection system was used to detect the bound antibodies. An anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) monoclonal antibody (Santa Cruz Biotechnology, TX, USA) was used as an internal loading control.
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2

Quantifying Cardiac Protein Expression

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All RVOT myocytes were centrifuged, washed with cold phosphate‐buffered saline and lysed on ice for 30 min in an RIPA buffer containing 50 mM Tris (pH 7.4), 150 mM NaCl, 1% NP40, 0.5% sodium deoxycholate, 0.1% SDS and protease inhibitor cocktails (Sigma‐Aldrich Corp.). The protein concentration was determined using a Bio‐Rad protein assay reagent (Bio‐Rad). Proteins were separated using 10% SDS‐PAGE under reducing conditions and electrophoretically transferred into an equilibrated polyvinylidene difluoride membrane (Amersham Biosciences). All blots were probed using primary antibodies against SERCA2a, NCX (Swant), CaMKII, phosphorylated CaMKII at Thr 286 (pCaMKII), ryanodine receptor (RyR) channels, PKA, connexin 43, stromal interaction molecule 1 (STIM1; BD BioScience), phosphorylated phospholamban at Ser16 (pPLB S16; GeneTex), mature collagen α1 type I (Santa Cruz Biotechnology), phosphorylated RyR at Ser2808 and Ser2814 (pRyR S2808 and pRyR S2814), phosphorylated PLB at Thr 17 (pPLB T17; Badrilla), PLB (Thermo), GADPH (MBL) and all secondary antibodies conjugated with horseradish peroxidase. All bound antibodies were detected using an enhanced chemiluminescence detection system and analysed using AlphaEaseFC software. All targeted bands were normalized to GADPH to verify the presence of equal protein loading.
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3

Comprehensive Immunoblotting Analysis of Cell Signaling

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Cell lysates were harvested in RIPA buffer (150 mM NaCl, 1 mM EGTA, 50 mM Tris at pH 7.4, 10% glycerol, 1% Triton X-100, 1% sodium deoxycholate, 0.1% SDS, and CompleteTM), and subsequently analyzed by Western blotting using antibodies against STIM1, FAK, paxillin, E-cadherin, ZO-1, fibronectin (BD Biosciences, San Jose, CA), Orai1, Orai3 (Prosci, Poway, CA), Orai2, phospho-Tyr397-FAK (Enzo, Farmingdale, NY), TRPC1 (Proteintec, Rosemont, IL), vinculin, vimentin, N-cadherin (Santa Cruz, Santa Cruz, CA), talin (abcam, Cambridge, UK), phospho-Tyr18-paxillin (Invitrogen, San Diego, CA), STIM2 (Cell Signaling, Danvers, MA), and β-actin (Sigma-Aldrich, Saint Louis, MO). The immunocomplexes were then detected with horseradish peroxidase-conjugated IgG (Jackson ImmunoResearch Laboratories, West Grove, PA), and the reaction was developed using an ECL detection kit (Amersham, Piscataway, NJ) under an ImageQuant LAS 4000 system (GE Healthcare Life Sciences, Pittsburgh, PA).
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4

Western Blotting of Apoptosis Regulators

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Cell lysates were harvested in RIPA buffer (150 mM NaCl, 1 mM EGTA, 50 mM Tris at pH 7.4, 10% glycerol, 1% Triton X-100, 1% sodium deoxycholate, 0.1% SDS, and CompleteTM), and the lysates were analyzed by Western blotting using antibodies against Bcl-2 (DAKO, Grostrup, Denmark), Bax, Bak, calnexin, SERCA2, β-actin (Santa Cruz Biotechnology, Santa Cruz, CA), porin (Molecular Probes, Eugene, OR), caspase-8, caspase-9, caspase-12, SERCA3, pSer70-Bcl-2, pThr167-Bax (Cell Signaling Technology, Beverly, MA), Grp78, STIM1, STIM2, IP3R3 (BD, Franklin Lakes, NJ), Orai1, Orai2, Orai3, and TRPC1 (ProSci, Poway, CA).
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5

Immunofluorescence Analysis of STIM-1 and Calnexin

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Cells were seeded as described for cytosolic Ca2+ imaging. 48 h post-seeding cells were processed for immunofluorescence analysis as previously described [60 (link)] Briefly, after washing in PBS, cells were fixed with 2% paraformaldehyde 0.05% glutaraldehyde. Cells were then permeabilised in PBS containing 0.2 % TRITON X-100 after which non-specific sites were blocked with Chemiblocker (5% in PBS/0.1% TRITON X-100; EMD Millipore). Cells were then labelled with primary antibodies against STIM-1 (BD Bioscience; 1:100) and calnexin (SIGMA; 1:500) diluted in blocking buffer overnight at 4 °C. After washing for 1 h, coverslips were incubated with Alexa-Fluor conjugated secondary antibody (dilution 1:500; Thermo Fisher). Coverslips were then mounted onto glass slides with Vectashield mounting agent containing DAPI (Vector laboratories). Cells were imaged using an Olympus FV1000 point-scanning confocal imaging system configured on an Olympus IX81 inverted microscope equipped with an Olympus PlanSApo 60x/1.35 oil objective.
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6

Western Blot and Cell-Surface Biotinylation Assay

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We conducted western blot analysis and cell-surface biotinylation assay as described previously8 (link),39 (link). Primary antibodies for VAMP2 (1:1000 dilution, ab181869), Orai1 (1:1000 dilution, ab86748), and β-actin (1:5000 dilution, ab6276) were obtained from Abcam. STIM1 (1:1000 dilution, 610954) and Flag-HRP (1:5000 dilution, A8592) were purchased from BD Biosciences (Clontech, Palo Alto, CA, USA) and Sigma-Aldrich, respectively. Antibodies against Akt (1:2000 dilution, 9272), p-AktSer473 (1:2000 dilution, 9271), and p-AktThr308 (1:2000 dilution, 2965) were obtained from Cell Signaling Technology (Beverly, MA, USA). GAPDH (1:10,000 dilution, sc25778), and antibodies against synaptopodin (1:1000 dilution, sc21537) were purchased from Santa Cruz Biotechnology. Antibodies against Orai2 (1:1000 dilution, ACC-061), Orai3 (1:1000 dilution, ACC-065), STIM2 (1:100 dilution, ACC-064), and TRPC6 (1:500 dilution, ACC-120) were obtained from Alomone Labs (Jerusalem, Israel).
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7

Characterizing Cellular Signaling Pathways

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Cell lysates were harvested in radioimmunoprecipitation assay (RIPA) buffer (150 mM NaCl, 1 mM EGTA, 50 mM Tris at pH 7.4, 10% glycerol, 1% Triton X-100, 1% sodium deoxycholate, 0.1% SDS, and CompleteTM), and the lysates were analyzed by Western blotting using antibodies against STIM1 (BD, Franklin Lakes, NJ, USA), Orai1, Orai3 (ProSci, Poway, CA, USA), Orai2 (Enzo, Farmingdale, NY, USA), TRPC1 (Proteintech, Rosemont, IL, USA), PDGFRα, JNK, phospho-EGFR, EGFR (Santa Cruz, Santa Cruz, CA, USA), phospho-PDGFRβ, PDGRβ (Abnova, San Francisco, CA, USA), STIM2, phospho-PLCγ, PLCγ, phospho-Akt, Akt, phospho-JNK, phospho-ERK, ERK, phospho-STAT3, STAT3, phospho-CREB, CREB (Cell Signaling, Beverly, MA, USA), and β-actin (Sigma, Saint Louis, MO, USA). The immune complexes were then detected with horseradish peroxidase-conjugated IgG (Jackson ImmunoResearch Laboratories, West Grove, PA, USA), and the reaction was developed using an enhanced chemiluminescence (ECL) detection kit under an ImageQuant LAS 4000 system (GE Healthcare Life Sciences, Pittsburgh, PA, USA).
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