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16 protocols using interleukin il 2

1

Evaluating EBV Peptide Immunogenicity

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The immunogenic potential of EBV-derived peptides was evaluated by functional immunoassays. PBMCs were isolated from blood of healthy HLA-A*03:01+EBV+ donors by density gradient centrifugation. Freshly isolated PBMCs were rested overnight (at 37°C, 5% CO2) at a density of 1 × 107 cells/well (24-well-plate, Sarstedt) prior to short- (overnight) and long-term (7 days) in vitro stimulation. The known HLA-A*03:01-restricted EBV-derived peptide RLRAEAQVK (A*03_EBNA3ARLRA, ProImmune [17 (link), 47 (link)]) and the peptide pool PepTivator EBV Consensus (EBV_Consensus, Miltenyi Biotec) have consistently been used as referential stimulating antigens.
On day 1, cells at a density of 5 × 106 cells/well (24-well-plate, at 37°C, 5% CO2) were stimulated with one of the eleven EBV-specific peptides (10 μg/ml) or with EBV_Consensus+4PMIX (Table 1) consisting of a combination of EBV_Consensus (1μg per peptide/ml) and the four highly immunodominant peptides (10 μg per peptide/ml). Cells were expanded in TexMACS-medium (Miltenyi Biotec) supplemented with 0.5 μl/ml interleukin (IL)-2 and 1 μl/ml IL-7 (both PeproTech) over 7 days.
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2

Generating Anti-CD123 CAR T Cells

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T cells were isolated from healthy donor peripheral blood mononuclear cells (PBMCs) using the human pan T cell isolation kit (Miltenyi Biotec). Purified CD3+ T cells were stimulated and cultured with human CD3/CD28 dynabeads (Gibco Biosciences) 2 days prior to lentiviral transduction. Lentiviral gene-transfer was performed at a multiplicity of infection (MOI) range of 5–10. For the NTD T cells, lentiviral-gene transfer was not performed. After 7 days, CD3/CD28 dynabeads were removed from the culture, and T cells successfully transduced with the CD123 CAR were determined by staining with biotinylated recombinant Protein-L (Pierce, ThermoFisher) (1 μg/106 cells), streptavidin-PE (1:20), and 7-AAD viability dye (BD Biosciences, San Diego, CA) (1:100). Successfully transduced CD123 CAR T cells were purified (sort purity >95%) using flow sorting. Purified anti-CD123 CAR T cells were then expanded in culture with recombinant human 100 U/mL interleukin (IL)-2 (Peprotech, Rocky Hill, NJ) for 10 days.
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3

PBMC Isolation and HIV-1 Infection

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For each experiment, PBMCs were isolated from fresh blood collected from four healthy HIV-negative donors by density gradient centrifugation.77 (link) PBMCs were resuspended to 1×106 cells/mL in C10 media and placed into 24-well cell culture plates. For all cell culture experiments, C10 media consisting of Roswell Park Memorial Institute medium (RPMI) 1640 with L-glutamine (Lonza, Basel, Switzerland) containing 10% fetal calf serum (FCS) (non-heat inactivated FCS; Highveld Biological (PTY) LTD, Johannesburg, South Africa), 2% L-glutamine, 1% 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES), 1% sodium pyruvate (NaPy), and 1% non-essential ammino acids (NEAA) (all from Lonza) was used. Interleukin (IL)-2 (PeproTech, Rocky Hill, New Jersey, USA), added to C10 media prior to use, was used at a final concentration of 0.01 µg/mL. Unstimulated PBMCs were used as the negative control and stimulation with phytohemagglutinin (PHA) (Sigma-Aldrich, St. Louis, Missouri, USA) was used as the positive control, at a final concentration of 10 µg/mL. The CCR5-tropic HIV-1 NL4-3 AD878 (link) was used at an multiplicity of infection (MOI) of 0.9, as previously described.77 (link)
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4

Establishment of HNSCC Primary Cell Lines

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Tumor tissue was collected from patients with untreated HNSCC undergoing surgical resection. Tissue was minced and digested in 0.25% trypsin. Half of the tissue was plated onto irradiated T293 feeder cells to establish primary cell lines in keratinocyte media (DMEM/F12, 24.2 µg/mL Adenine Sigma, 1× non-essential amino acids, 100 µg/mL Primocin, 0,4 µg/mL hydrocortisone Sigma, 5% FBS, 1× sodium pyruvate, 8.3 ng/mL high Cholera toxin Sigma, 10 µM rock inhibitor Cayman chemical, 1× ITS Thermo Fisher and 0.05 µg/mL EGF Sigma)) and half was plated into 24-well plates in TIL media (Roswell Park Memorial Institute [RPMI], 1× Pen/Step, 1× sodium pyruvate, 2.5 mL of 7.5% stock solution sodium bicarbonate, 0.00025% 2-mercaptoethanal Fisher, 10% human serum Sigma, 6000 U/mL interleukin (IL)-2 (PeproTech), and 100 µg/mL Primocin) Invivogen. Cells were continuously cultured and split regularly to maintain growth.
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5

Isolating Skin T Cells for L-CTCL Study

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Skin T cells from patients with L-CTCL and healthy donors were isolated from skin biopsies by short-term explant technique. Briefly, skin biopsies cut into small pieces were cultured on collagen-coated Cellfoam matrices in Iscove’s modification of Dulbecco’s media supplemented with 20% heat-inactivated FBS, 1% antibiotic-antimycotic (Gibco™), 2 mM L-glutamine, 100 IU/mL interleukin IL-2 and 10 ng/mL IL-15 (Peprotech) as previously reported.45
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6

Culturing Transfected CHO Cells and Primary Lymphocytes

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Chinese hamster ovary (CHO) cells transfected with CXCR3A were cultured in Ham’s F-12 growth medium (Gibco; Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 10% (v/v) heat-inactived fetal calf serum (FCS, Sigma-Aldrich, Saint Louis, MO, USA), 400 µg/ml G418 (Carl Roth, Karlsruhe, Germany), 1 mM sodium pyruvate (Gibco) and 0.12% (v/v) sodium bicarbonate (Gibco) [34 (link)]. Human microvascular endothelial cells (HMVEC; Cell Systems, Kirkland, WA, USA) were cultured in endothelial cell basal medium-2 (EBM-2: Lonza, Basel, Switzerland) supplemented with the EGM-2 MV SingleQuots kit (Lonza). For culturing of primary lymphocytes, PBMC were purified from buffy coats of healthy volunteers (Red Cross, Mechelen, Belgium) through gradient centrifugation, as previously described [101 (link)]. T lymphoblasts were generated through culturing mononuclear cells in 2 µg/mL PHA (Sigma-Aldrich) and 50 U/ml interleukin (IL)-2 (PeproTech, Rocky Hill, NJ, USA), as formerly described [34 (link)].
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7

Assessing PD-1:PD-L1 Blockade Effects on PBMCs

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PBMCs were isolated from fresh heparinized blood using Ficoll-Hypaque density gradient centrifugation at 800 × g for 20 min (HaoYang Biological Manufacture Co., Ltd., Tianjin, China) and were resuspended in RPMI-1640 medium supplemented with 10% fetal bovine serum and 1% penicillin-streptomycin (Gibco; Thermo Fisher Scientific, Inc.).
To assess the effects of blocking the PD-1:PD-L1 signaling pathway, PBMCs from HLA-A2+ individuals were cultured in a flat-bottomed 96-well plate (2–10×105 cells/well) in the presence of 5 µg/ml HBcAg18-27 peptide, 5 µg/ml anti-PD-L1 or control IgG for PD-1:PD-L1 for 10 days, supplemented with 25 IU/ml interleukin (IL)-2 (PeproTech, Inc., Rocky Hill, NJ, USA) and 0.5 µg/ml anti-CD28 at 0 and 5 days.
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8

Isolation and Expansion of Primary CD4+ T Cells and CD34+ HSCs

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Human peripheral blood mononuclear cells (PBMCs) were purified from buffy coats of three different donors, obtained from the Red Cross blood transfusion center, using density-gradient centrifugation (Lymphoprep; Axis-Shield). Primary CD4+ T cells were selectively enriched using bi-specific monoclonal antibody (mAb) CD3.8 (0.5 μg/mL, NIH AIDS Reagents Program; https://www.aidsreagent.org) for 5 days. CD4+ T cells were cultured in RPMI medium supplemented with 15% FBS, gentamycin, interleukin (IL)-2 (100 U/mL; Peprotech), and MEM Non-Essential Amino Acids Solution (MEM NEAA) (50 μg/mL; Gibco-BRL), referred to as T-cell medium (TCM). CD34+ HSCs were positively selected with anti-CD34-conjugated microbeads according to the manufacturer’s instructions (MACS; Miltenyi Biotec) and stimulated for 48 hr in StemSpan SFEMII medium containing CC100 Cytokine Cocktail (STEMCELL Technologies).
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9

Enrichment and Activation of AML-Specific T Cells

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Bone marrow mononuclear cells (BMMC) and peripheral blood mononuclear cells (PBMC) were enriched by density-gradient centrifugation using Ficoll-Hypaque (Supplier, Country). Cells were then labeled with CD3 microbeads (Miltenyi Biotech, Germany) for 15 mins at 4°C–6°C. Immunomagnetic device VarioMACS (Miltenyi Biotech, Germany) was used for cell selection according to the manufacturer’s protocol. CD3+ cells were considered AML TIL, whereas CD3-cells were considered autologous AML cells.
BMMC and PBMC were seeded at 1×106 cells/mL in X-VIVO 15 medium (Lonza, Switzerland) supplemented with 5% heat-inactivated human serum, 100 ng/mL anti-CD3, 1000 IU/mL of interleukin (IL)-2, 10 ng/mL of IL-7 and 10 ng/mL of IL-15 (PeproTech, USA) and co-cultured with 50 Gy-irradiated PBMC derived from unrelated donors as feeder cells at the ratio (10:1) of feeder cells to BMMC or PBMC for 14 days at 37°C. Fresh X-VIVO 15 medium with cytokines was added whenever the medium turned yellow.
AML TIL were cultured with autologous AML cells at the ratio of 1:1 in X-VIVO 15 medium with 5% heat-inactivated human serum, 10 ng/mL of IL-7 and 10 ng/mL of IL-15 overnight at 37°C. Cultured cells were washed with phosphate-buffered saline (PBS) and labeled with CD137 microbeads. Immunomagnetic sorting was conducted using the selection kit according to the manufacturer’s instructions (Miltenyi Biotech, Germany).
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10

Isolation and Expansion of HBV-Specific CD8+ T Cells

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PBMCs from human leukocyte antigen A (HLA‐A)*02‐positive (+) donors with chronic HBV infection were isolated through a standard Ficoll gradient. Informed consent in writing was obtained from each patient. PBMCs were stimulated by 10 μM of HBV core18‐27I peptide (FLPSDFFPSI; Sangon Biotech, Shanghai, China) for 10 days in X‐VIVO 15 (#04‐418QCN; Lonza) plus 10% human AB serum, 1% GlutMAX supplement (#35050061; Gibco), and penicillin‐streptomycin (#15140122; Gibco). We added 50 IU/mL interleukin (IL)‐2 (#200‐02; PEPROTECH), 10 ng/mL IL‐7 (#200‐07, PEPROTECH), and IL‐15 (#C016; Novoprotein) on day 1 and changed this solution every 2 days. T cells stained with R‐phycoerythrin (R‐PE)‐labeled Pro5 HLA‐A*02:01/FLPSDFFPSI pentamer (#F283‐2A‐G; Proimmune) were isolated by anti‐PE MicroBeads (#130‐105‐639; Miltenyi Biotec) according to the manufacturer’s protocol, followed by a rapid expansion protocol.
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