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Cobas taqman hbv test v2

Manufactured by Roche
Sourced in United States, Japan

The COBAS TaqMan HBV Test v2.0 is a quantitative in vitro nucleic acid amplification test for the detection and quantification of hepatitis B virus (HBV) DNA in human plasma or serum specimens. The test utilizes real-time PCR technology to provide accurate and reproducible measurements of HBV DNA levels.

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12 protocols using cobas taqman hbv test v2

1

Serological and Molecular Markers of Hepatitis B

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The standard laboratory procedures were used to detect the virological, biochemical, and serological parameters. All relevant tests were performed by the laboratory department of our hospital. Commercial kits (Abbott Laboratories; Lake Bluff, IL, USA) were used to test serum HBsAg. COBAS TaqMan HBV Test v2.0 (Roche Diagnostics, Branchburg, NJ, USA) was used to assess serum HBV DNA levels. A serum level of 40 IU/mL and 35 IU/mL was set as the upper normal limit of ALT and AST, respectively. A serum HBV DNA level of less than 20 IU/mL was defined as negative.
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2

Quantifying HBV DNA and HDV RNA

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HBV DNA was quantified by the COBAS TaqMan HBV test V2.0 (Roche Diagnostics, GmbH, Mannheim, Germany) and HDV RNA was quantified by an in-house method, based on a complete genomic HDV RNA standard [23 (link)]. HDV genotyping was performed by Sanger sequencing. The region analyzed by NGS was also used for genotyping. Both methods identified HDV as genotype 1 in all samples.
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3

Comprehensive HBV Assessment Protocol

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Serum HBV-DNA levels were measured with COBAS TaqMan HBV Test v2.0 (Roche Diagnostics K.K., Tokyo, Japan); the lower limit of quantification was 20 IU/mL. Serum HBsAg levels were measured by chemiluminescence immunoassay using the Architect HBsAg QT assay kit (Abbott Japan Corp, Tokyo, Japan), and the HBeAg, anti-HBe and HBcrAg levels were measured by chemiluminescence enzyme immunoassay using the Architect HBeAg (Abbott Japan Corp,), Architect HBeAb (Abbott Japan Corp,) and Lumipulse HBcrAg (Fuji-Rebio, Tokyo, Japan) kits [12 (link)], respectively. The infecting HBV genotype was identified by enzyme-linked immunosorbent assay using monoclonal antibodies directed against type-specific epitopes in the preS2-region (Institute of Immunology, Tokyo, Japan).
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4

HBV Serological and Molecular Assays

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Blood testing for HBs antigen and HBe antigen and HBe antibody were performed using commercially available kits (Abbott or Fujirebio, Tokyo, Japan). We measured HBV-DNA load by using the COBAS Amplicor HBV Monitor Test (Roche Diagnostics, Tokyo, Japan: linear range of detection; 2.6-7.6 log copies/ml) or by using the COBAS Taqman HBV Test v2.0 (Roche Diagnostics, Tokyo, Japan: linear range of detection; 2.1-9.0 log copies/ml).
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5

Quantification of Serum Biomarkers in HBV

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All routine laboratory data were collected immediately before the first NA treatment and serially during the treatment. Serum M2BPGi level was measured using serum samples that had been stored at −20 °C. M2BPGi quantification was performed by an immunoassay using a commercially available kit (HISCL M2BPGi; Sysmex Co., Kobe, Japan) and a fully automatic immunoanalyzer (HISCL-5000; Sysmex Co.). Serum HBV viral load was determined using a COBAS TaqMan HBV test v2.0 (Roche Diagnostics, Branchburg, NJ), which has a dynamic range of 2.1–9.0 log copies (LC)/mL. Quantitative measurements of HBsAg, Hepatitis B e-antigen (HBeAg), and hepatitis B core-related antigen (HBcrAg) were conducted using commercial chemiluminescent enzyme immunoassay kits.
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6

Longitudinal Analysis of HBV Markers

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Blood was collected from the 51 subjects to measure biochemical values at week 0 (before the experiment), and the 4th, 12th, 24th, 48th weeks (in the experiment) and in the 4th and 12th weeks after the experiment. Heparinized blood was collected to evaluate liver and kidney function and genotype, and to quantify HBV-DNA concentration, HBsAg, and HBeAg. Serum HBV-DNA levels (copies/mL) were measured by polymerase chain reaction (PCR) using Cobas TaqMan HBV Test, v2.0 (Roche Molecular Systems, Pleasanton, CA, USA), according to the manufacturer’s instructions. Quantification of HBsAg was performed by an automated chemiluminescent micro-particle immunoassay (CMIA) using the Roche Cobas e602 analyzer with Elecsys HBsAg II Quant reagent kits (Roche Diagnostics, Santa Clara, CA, USA), according to the manufacturer’s instructions. Quantification of HBeAg was conducted by an automated chemiluminescent micro-particle immunoassay (CMIA) using the Roche Cobas e602 analyzer with Elecsys HBeAg Quant reagent kits (Roche Diagnostics, CA, USA), according to the manufacturer’s instructions. The remaining blood was segregated into serum and cells. Serum was stored as aliquots in liquid nitrogen until analysis and cells were analyzed to determine the T cell subtypes.
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7

HBV DNA Monitoring During Treatment

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Blood HBV DNA measurements were performed using the COBAS TaqMan HBV Test, v 2.0 (Roche Diagnostics, K.K. Tokyo, Japan) (~2017/4/2) and COBAS 6800-8800 system HBV (Roche Diagnostics K.K.) (2017/4/3~), which is based on the polymerase reaction assay. The HBV DNA values were measured before the start of treatment, every month for 3 mo after the start of treatment, and every 3 mo thereafter until the completion of treatment. If HBV DNA expression was undetected after treatment, the measurements were continued for 1 year from the completion of treatment. The frequencies at which the HBV DNA value was higher than the detection sensitivity and at which the HBV DNA value was 1.3 Log IU/mL or higher were examined.
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8

HBV Serological and Virological Assays

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The biochemical, serological, and virological parameters were measured using standard laboratory procedures. HBV serology included HBsAg, anti-HBs, hepatitis B e-antigen (HBeAg), anti-HBe, and anti-HBc tests. Serum HBsAg test was performed using commercial kits (Abbott Laboratories; Lake Bluff, IL, USA). Serum HBV DNA levels were assessed via real-time polymerase chain reactions (COBAS TaqMan HBV Test v2.0, Roche Diagnostics, Branchburg, NJ, USA). A serum HBV DNA level at 20 IU/mL was set as the threshold for HBV-DNA positivity. HBeAg seroconversion was defined by the disappearance of HBeAg with or without detectable anti-HBe.
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9

Hepatocellular Carcinoma Resection Cohort

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Nineteen HCC patients who underwent surgical resection at Kobe University Hospital were enrolled in this study. Of the 19 patients, 9 (age 69.7 ± 5.6 years, 8 males and 1 female) were serologically negative for HBsAg, while 10 (age 53.0 ± 11.5 years, 9 males and 1 female) were positive for HBsAg. Laboratory data including platelet counts, transaminase levels, haemoglobin A1c, hyaluronic acid and quantitative HBsAg levels (HBsAg-HQ: Fujirebio, Tokyo, Japan) at the time of surgery were retrieved from patients’ medical records. In addition, hepatitis B core antibody (anti-HBc; Architect AUSAB, Abbott Japan, Tokyo, Japan) and HBV DNA levels (Cobas® TaqMan HBV Test, v2.0, Roche Diagnostics, Basel, Switzerland) were also examined. The cut-off levels of HBsAg-HQ and HBV DNA were estimated 5 mIU/ml and 2.06 log copies/ml, respectively. Patients negative for anti-HBc or positive for hepatitis C virus antibodies were excluded from this study.
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10

Hepatitis B and C Serological Assays

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HBsAg was measured using the Architect HBsAg QT assay (Abbott Japan, Tokyo), and anti-HCV antibodies were measured using the Architect HCV assay (Abbott Japan, Tokyo). HBV-DNA was measured using COBAS TaqMan HBV Test v. 2.0 (Roche Diagnostics K.K., Tokyo, Japan), and HCV-RNA was measured using the COBAS TaqMan HCV Test v. 2.0 (Roche Diagnostics K.K.).
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