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6 protocols using amyloglucosidase solution

1

Quantifying Liver Glucose and Glycogen

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Liver glucose and glycogen content was assayed enzymatically as previously described (26 (link)). Frozen liver (≈20 mg) from fed mice was lysed in deionized water (500 μl) using metal beads in a Tissue Lyser (Qiagen) and the resulting lysates were centrifuged at 12,000 g for 20 minutes at 4°C. The supernatant (75 μl) was boiled for 3 minutes and, once cooled, mixed with an amyloglucosidase solution (Sigma-Aldrich 25 μl diluted 1:5 in KAc 0.1 M buffer pH 5,5) and left overnight at room temperature to hydrolyze glucose incorporated into glycogen. Samples were boiled for 3 minutes to stop the reaction and centrifuged for 3 minutes at 12.000 g and glucose was analyzed using the HK assay kit (Sigma-Aldrich) following manufactureŕs instructions. A reaction without amyloglucosidase provided the amount of free glucose (expressed as μg per mg of tissue). To obtain the amount of glucose derived from glycogen in each sample, free glucose value was subtracted from that of total glucose after amyloglucosidase digestion.
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2

Hepatic Glycogen and Glucose Quantification

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The level of glycogen and free glucose were determined as previously described20 (link). Frozen liver (~50 mg) was homogenized in 250 µL of 6% perchloric acid using a Polytron PT21000 (Kinematica AG, Luzern, Switzerland). A portion of the homogenate was used to measure background glucose while another portion of the homogenate (50 µL) was combined with 25 µL of 1 M NaHCO3 and 125 µL of amyloglucosidase solution (2 mg/mL; Sigma Aldrich, St. Louis, MO). The mixtures were incubated with shaking at 37 °C for 2 hours. Background-corrected glucose levels in the amyloglucosidase-treated samples were used to infer hepatic glycogen levels. Glucose was assessed using commercially-available reagents (FUJIFILM Wako Diagnostics, Richmond, VA) and a SpectraMax M2 microplate reader (Molecular Devices, San Jose, CA). The sample size (n) was 5 for each group and mice were randomly selected.
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3

Evaluation of Antioxidant and Digestive Enzyme Inhibition Activities

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ABTS (2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid)), Trolox (6-hydroxyl-2,5,7,8-tetramethylchroman-2-carboxylic acid), DPPH (2,2-diphenyl-1-picrylhydrazyl), TFA (trifluoroacetic acid), gallic acid, Folin–Ciocalteu reagent (FC), pepsin from porcine gastric mucosa-lyophilized powder, α-amylase and pancreatin from porcine pancreas, heat-stable α-amylase solution, protease, amyloglucosidase solution, 2-(N-Morpholino) ethanesulfonic acid (MES), and Tris (hydroxymethyl) aminomethane (TRIS) were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA). Technical grades of methanol (MeOH) (>98.5%), ethanol (C2H5OH) (93%), sodium hydroxide (NaOH) (97%), sodium chloride (NaCl) (97%), potassium persulfate (K2S2O8) (100%), sodium carbonate (Na2CO3) (>99%), nitric acid (HNO3) (>99%), sulfuric acid (H2SO4) (>97%), hydrochloric acid (HCl) (37.2% w/w), petroleum ether (C6H14) (30–60 °C, A.R), Kjeldahl tablet (CuH10O9S), potassium chloride (KCl) (> 99%), sodium hydrogen carbonate (NaHCO3) (>99%), sodium chloride (NaCl) (97%), magnesium chloride (MgCl2) (99%), ammonium chloride (NH4Cl) (100%), calcium chloride (CaCl2) (>93%), monopotassium phosphate (KH2PO4), and indicators (tashiro and phenolphthalein) were purchased from VWR International (Leuven, Belgium). Inductively coupled plasma (ICP) multi-element standard solution IV was procured from Merck KGak (Darmstadt, Germany).
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4

Muscle Glycogen Quantification Protocol

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Muscle glycogen concentrations were determined as described by Dreiling et al [15 (link)]. Briefly, 200 mg of muscle sample was homogenized with 2 mL cold 8% (v/v) perchloric acid using a polytron (Ultra Turrax T25 disperser, IkA-Labortechnik, Staufen, Germany) and then centrifuged at 15,000×g for 10 min. The supernatant was neutralized with saturated sodium bicarbonate solution and 0.2 M sodium acetate buffer (pH 4.8). A glycogen standard curve was established by dissolving 0 to 90 μg of bovine liver glycogen (Cas no. 9005-79-2, Sigma-Aldrich, Darmstadt, Germany) in neutralized perchloric acid. Each standard and neutralized supernatant were incubated in amyloglucosidase solution (A7255, Sigma-Aldrich, Germany) for 30 min at 55°C to convert glycogen to glucose. The concentration of glucose was determined using Enzymatic Glucose Reagent (Infinity Glucose Oxidase Reagent, Thermo Scientific, Lidcomb, NSW, Australia), by measuring the absorbance at 550 nm on a 96-well microplate reader (Infinite F50, Tecan, Switzerland).
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5

Measuring Total Dietary Fiber in Winemaking By-Products

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The total dietary fibre (TDF) of winemaking by-products was measured following the standard enzymatic-gravimetric method [40 ]. First, 1 g of dry sample was mixed into 50 mL of distilled water. Then, samples were digested with 200 µL of α-amylase (Sigma-Aldrich, St. Louis, MO, USA) at 80 °C for 1 h with constant agitation. After digestion, 100 µL of amyloglucosidase solution (50 mg/mL) (Sigma-Aldrich) was added and the mixture was kept at 60 °C for 3 h. Next, the pH was adjusted to 7.0 with NaOH 10% (w/v), followed by incubation with 200 µL of protease (Sigma-Aldrich) at 80 °C for 1 h. Finally, digested samples were vacuum filtered with cellulose-free filters (Whatman glass microfiber filters, 934-AHTM). The solid fraction contained in the filter represented insoluble dietary fibre (IDF). To precipitate the soluble dietary fibre (SDF), 4 volumes of 96% ethanol were added to the filtrate at 60 °C. Both fractions of fibre were dried overnight at 45 °C in an oven and were then weighed. The TDF was calculated as the sum of IDF and SDF. The results were expressed as g/100 g dry sample. All experiments were conducted in triplicate.
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6

Lipid and Glycogen Quantification in Drosophila

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TAG and glycogen measurements were essentially as in [40 (link)]. We seed 60 1st instar larvae per vial to grow under defined density conditions. Hatching adults were collected within a 12-hour window, and allowed to age 3 or 4 days as indicated. Three times 8 animals were crushed in 500μl 1xPBS with 0.05% Tween-20 (Applichem, A1389) and heat-inactivated for 5 minutes on 70°C. 100μl lysate were cleared of debris and used for Protein concentration measurement using Bradford reagent (BIORAD protein assay, 500–0006). 200μl lysate were used for TAG measurement by adding 2μl of Lipase (Calbiochem, cat 437707) to the lysate, incubating at 37°C ON, spinning down debris and analyzing by using the free glycerol reagent from Sigma (F6428). For glycogen measurement, another 200μl of the original lysate were split into two times 30μl–a control lysate and one lysate to which 1 μl of amyloglucosidase solution (14 U per μl, Sigma 10115) was added. After 1h incubation at 50°C, both lysates were analyzed using the Glucose reagent from Sigma (G3293) and subtracting the glucose content of the control lysate from the amyglucosidase lysate to yield relative glycogen levels of each sample.
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