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5 protocols using annexin 5 af647

1

Apoptosis Assay with Annexin V

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Cells were stained with annexin V-AF647 (5 μl; Invitrogen) and 7-AAD (5 μl; BioLegend) in 100 μl of annexin-binding buffer (10 mM HEPES, 140 mM NaCl, and 2.5 mM CaCl2, pH 7.4) for 15 min at RT. After the incubation period, 400 μl of annexin-binding buffer was added. Infection efficiency was determined based on GFP fluorescence. Events were acquired on a FACSCalibur flow cytometer with CellQuest software (BD Bioscience) and analyzed using FlowJo software (TreeStar).
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2

Macrophage Apoptosis Assay Protocol

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RAW264.7 macrophages
were plated on
24-well plates 4 h before the experiment and incubated at 37 °C.
Macrophages were stimulated (with LPS or IL-4), and compounds were
added to the cells at the indicated concentrations and incubated at
37 °C for 20 h. Cells were detached, resuspended in CaCl2 buffer (20 mM HEPES Buffer, 140 mM NaCl, 2 mM CaCl2, 0.1% BSA), and analyzed by flow cytometry (BD FACSCalibur cytometer,
Becton Dickinson) using Annexin V-AF647 (Invitrogen) as the marker
for apoptotic cells and/or compound 5 as indicated. Data
analysis was performed with the software Flowjo.
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3

iCasp9-NK Cell Apoptosis Analysis

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The iCasp9-NK cells along with unmodified NK cells were incubated for 24 h in a medium, with the addition of: PBS, DMSO, and 100 nM of chemical inductor of dimerization (CID) (AP20187 (MedChemExpress, Monmouth Junction, NJ, USA). DMSO was taken at a concentration corresponding to its content in a sample with 100 nM CID. The level of apoptosis and cell viability were measured by flow cytometry with the use of AnnexinV-AF647 (Invitrogen, San Jose, CA, USA) and Sytox-VioBlue (Invitrogen, San Jose, CA, USA).
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4

PBMC subsets analysis after ALA treatment

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After incubation with ALA alone or ALA plus light, the cells were centrifuged and the supernatants were kept at −80 °C for the isolation, labelling, and measurements of cytokines and exosomes as described in Section 2.7. The cells were then incubated in PBS (2% FBS) with an antibody concentration of 2 µL/mL and AnnexinV concentration of 50 µL/mL. The cells were washed with PBS (2% FBS), centrifuged, and the supernatants removed. The amounts of ALA-induced PpIX (1 h antibody incubation) and cell viabilities (1.5 h antibody incubation) in the individual subsets of PBMCs were measured with 4 antibody/dye combination methods: (1) CD3-FITC (Invitrogen, Carlbad, CA, USA), CD19-PE (ImmunoTools GmbH, Friesoythe, Germany), Fixable viability dye-eF450 (Invitrogen), AnnexinV-AF647 (Life Technologies, Eugene, OR, USA); (2) CD3-FITC, CD56-APC-eF780 (Invitrogen), Fixable viability dye-eF450, AnnexinV-PE (Invitrogen); (3) CD4-FITC (eBioscience, San Diego, CA, USA), CD8-PE (Invitrogen), Fixable viability dye-eF450, AnnexinV-AF647; (4) CD11c-FITC (ImmunoTools), CD14-PE/Cy7 (Invitrogen), Fixable viability dye-eF450, Annexin V-AF647. The measurements were done using a Cytoflex S cytometer (Beckman Coulter Life Sciences, Indianapolis, IN, USA) with the Cytexpert software (Version 2.1, Beckman Coulter); and the analyses were performed using FlowJo software (Version 10, Treestar, Ashland, OR, USA).
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5

Assessment of PBMC Apoptosis

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PBMC were resuspended in RPMI 1640 plus 10% fetal calf serum at a concentration of 0.5 × 106 cells/mL per well. Cells were incubated at 37 °C, 5% CO2, for 20 h for the evaluation of spontaneous apoptosis. Apoptosis was detected by annexinV-AF647 (Invitrogen, San Jose, CA, USA) and propidium iodide (PI, Sigma-Aldrich, St. Louis, MO, USA). PBMC were analyzed by flow cytometry after incubation with annexinV-AF647 for 15 min at RT and the addition of PI solution (2 μg/mL). AnnexinV-positive, PI-negative cells were considered to be undergoing apoptosis.
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