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7 protocols using ab155999

1

Western Blot and IHC Analysis of CRC

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Western blotting (WB) was performed as described previously [23] . The primary antibodies used were as follows: anti-β-actin (66009-1-Ig, Proteintech, 1:10000), anti-SDHC (ab155999, Abcam,1:10000), anti-ACOX1 (10957-1-AP, Proteintech, 1:1000), anti-CPT1A (15184-1-AP, Proteintech, 1:1000), anti-ALDH3A2 (15090-1-AP, Proteintech, 1:1000), anti-P-AKT (66444-1-Ig, Proteintech, 1:1000), anti-P-PI3K (4228, Cell Signaling, 1:1000), anti-PI3K (T40115, Abmart, 1:1000), and anti-AKT (T55561, Abmart, 1:1000). Image J software was employed to analyze relative protein expression.
For immunohistochemistry (IHC) analysis, CRC specimens were fixed with 10% formaldehyde and then embedded in paraffin. After preparing 4-μm-thick continuous paraffin sections, deparaffinization and antigen retrieval were performed following the manufacturer's instructions. These sections were incubated with anti-SDHC (ab155999, 1:250, Abcam) antibodies. After incubated with secondary antibodies (PV-6001, ZSGB-BIO), the sections were visualized with a DAB chromogenic agent (ZLI-9017, ZSGB-BIO) and observed under a microscope.
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2

Evaluating SDHB and SDHC Protein Levels

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Protein lysates were isolated from snap-frozen tumor and non-neoplastic tissues, and 10–50 μg of lysate were loaded on a western blot. Protein levels were evaluated for SDHB (1:500 dilution, HPA002868, Sigma–Aldrich) and SDHC (1:1000 dilution, ab155999, Abcam, Cambridge, UK), with ACTB (1:5000 dilution, A5441, Sigma–Aldrich) serving as loading control.
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3

Comprehensive Mitochondrial Protein Analysis

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The following specific antibodies were used for Western blot analysis: anti-UQCRFS1 (1:1000 dilution, ab14746, Abcam), anti-NDUFS1 (1:1000, ab169540, Abcam), anti-VDAC1 (1:3000, ab14734, Abcam), OXPHOS cocktail (1:1000, ab110413, Abcam), anti-LC3 (1:1000, ab51520, Abcam), anti-PINK1 (1:500, ab23707, Abcam), anti-parkin (1:500, #4211, Cell Signaling Technology), anti-ubiquitin (1:1000, P4D1, BioLegend), anti-PGC-1α (1:1000, ab106814, Abcam), anti-PPARα (1:1000, GTX101098, GeneTex), anti-TFAM (1:1000, GTX103231, GeneTex), anti-ATP5A (1:1000, ab14748, Abcam), anti-SDHA (1:1000, GTX101689, GeneTex), anti-SDHB (1:2000, GTX104628, GeneTex), anti-SDHC (1:500, ab155999, Abcam), and anti-SDHD (1:500, ab189945, Abcam) antibodies.
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4

Western Blot Analysis of SDHC and GAPDH

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All the proteins were extracted. The cell lysate was run on SDS-PAGE and then transferred to a PVDF membrane (MILLIPORE). The membrane was then blocked with 5% fat-free milk for 2 hours at room temperature. Next, the membrane was probed with a primary antibody at 4°C overnight. The primary antibodies against were SDHC (Abcam, Ab155999, 1 : 10000) and GAPDH (Abcam, Ab8245, 1 : 1000). After washing, the membrane was incubated with appropriate secondary antibodies (Bioswamp) at 4°C overnight as well. The membrane was stained with enhanced chemiluminescence reagent and visualized using the automatic chemiluminescence analyzer (Tanon).
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5

Lysate Preparation and Protein Analysis of Lung Tumors

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Whole-cell lysates of lung tumours isolated from GEMMs were generated by homogenizing snap-frozen tumour tissues in lysis buffer (20 mM Tris pH 7.5, 150 mM NaCl, 1% (v/v) Triton X-100, 50 mM sodium fluoride, 1 mM EDTA, 1 mM EGTA, 2.5 mM pyrophosphate, 1 mM sodium orthovanadate, complete protease inhibitor cocktail). Whole-cell lysates were centrifuged at 2,000g for 5 min and supernatants were transferred to empty tubes. Supernatants were stored at −80 °C until use. Whole-cell lysates of in vitro-cultured cells were generated by homogenizing the cells SDS lysis buffer (100 mM Tris pH 7.5, 100 mM NaCl, 1% SDS, protease inhibitor cocktail) followed by heat inactivation at 90 °C for 10 min. Protein concentration was determined by BCA assay (Thermo Fisher). Lysates were run on 4–12% Bis-Tris gels (Thermo Fisher) to separate the proteins, and then transferred to PVDF membrane. Membranes were stained with Poceau S to confirm transfer efficiency. Membranes were then probed with the following antibodies: SP-C (1:5,000, AB3786 Millipore); GLUT1 (1:2,000, GT11-A, Alpha Diagnostic); NDUFS1 (1:1,000, ab169540, Abcam); O-linked N-acetylglucosamine (1:1,000, ab2739, Abcam); SDHA (1:1,000, 5839, Cell Signaling Technology); SDHC (1:1,000, ab155999, Abcam); actin (1:5,000, A3853, Sigma); tubulin (1:2,500, T9026, Sigma).
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6

Immunohistochemical Analysis of RECQL4 and SDHC in Ghanaian Breast Cancer

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Immunohistochemistry was performed on the TMA containing 100 invasive carcinomas from Ghanaian women. Four-micron think sections of the TMA were prepared for staining with H&E and immunohistochemistry using a standard biotin-avidin complex technique, anti-RECQL4 (Abcam; ab188125, rabbit polyclonal, 1:50) and anti-SDHC (Abcam, ab155999 rabbit monoclonal, 1:2500) antibodies. Nuclear expression of RECQL4 and cytoplasmic expression of SDHC was interpreted independently by two pathologists (MR and CK). For each case the staining was graded as negative (score=1, no staining); weak (score 2, <25% of cells staining, any intensity); moderate (score=3, 25–75% of cells staining, any intensity); and strong (score=4, >75% of cells staining, any intensity) following previous studies (12 (link), 21 (link)). High RECQL4 or SDHC expression was defined as scores 3 and 4; and low expression was defined as scores 1 and 2.
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7

Immunohistochemical Analysis of RECQL4 and SDHC in Ghanaian Breast Cancer

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Immunohistochemistry was performed on the TMA containing 100 invasive carcinomas from Ghanaian women. Four-micron think sections of the TMA were prepared for staining with H&E and immunohistochemistry using a standard biotin-avidin complex technique, anti-RECQL4 (Abcam; ab188125, rabbit polyclonal, 1:50) and anti-SDHC (Abcam, ab155999 rabbit monoclonal, 1:2500) antibodies. Nuclear expression of RECQL4 and cytoplasmic expression of SDHC was interpreted independently by two pathologists (MR and CK). For each case the staining was graded as negative (score=1, no staining); weak (score 2, <25% of cells staining, any intensity); moderate (score=3, 25–75% of cells staining, any intensity); and strong (score=4, >75% of cells staining, any intensity) following previous studies (12 (link), 21 (link)). High RECQL4 or SDHC expression was defined as scores 3 and 4; and low expression was defined as scores 1 and 2.
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