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4 protocols using ab51177

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Immunohistochemical Scoring Protocol for Protein Expression

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IHC was performed as previously described [24 (link), 25 (link)]. Antibody against SHCBP1 (12672–1-AP) was purchased from Proteintech (Wuhan, China). Antibodies against phosphorylated (p)-Smad2 (ab53100), p-Smad3 (ab51177) and TGF-β1 (ab25121) were purchased from Abcam (Cambridge, MA). All sections were assessed and scored by two independent pathologists (Xiaoying Wang and Chengjun Zhou) in a blind manner. Ten high-power fields were selected randomly for each slide. The expression levels of each marker in tumor cells were independently evaluated. The percentage of positive-staining cells were graded on a scale of 0 to 3, with less than 5% positive-staining cells as grade 0, 5 to 25% as grade 1, 26 to 50% as grade 2, and more than 50% as grade 3. The intensity of staining was also graded on a scale of 0 to 2, with negative to weak intensity as grade 0, weak to moderate intensity as grade 1, and moderate to strong intensity as grade 2. After that, the percentage score was multiplied by the intensity score. A final score between 0 and 2 was defined as low expression, and a score higher than 2 was defined as high expression.
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Western Blot Analysis of Osteogenic Markers

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RNA immunoprecipitation assay lysis buffer (Beyotime, Shanghai, China) was used for extracting proteins from femur tissues and human osteoblasts. The protein concentrations were assessed by a bicinchoninic acid protein assay kit (Beyotime, China), and then received subjection to 10% sodium dodecyl sulfate, polyacrylamide gel electrophoresis gel and shifted onto polyvinylidene difluoride membranes (Millipore, USA). Membranes were then sealed with 5% nonfat milk, followed by treatment with the primary antibodies at 4℃ overnight. The primary antibodies were: COL1A1 (sc-293182, Santa Cruz Biotechnology), COL1A2 (sc-393573, Santa Cruz Biotechnology), ALP (ab224335, Abcam), OCN (ab133612, Abcam), TGF-β (ab215715, Abcam), Smad3 (ab40854, Abcam), p-Smad3 (ab51177, Abcam), Smad2 (ab40855, Abcam), p-Smad2 (ab188334, Abcam), BMP2 (ab214821, Abcam) and β-actin (ab6276, Abcam). Next, the membranes were cultured with secondary antibodies at room temperature for 1 h. β-actin acted to be the internal control. An enhanced chemiluminescence detection kit (Thermo Fisher Scientific) was adopted for visualizing protein bands and the ImageJ software was used for densitometry analysis of the band intensity.
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Immunohistochemistry of Kidney Samples

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Kidney samples freshly sectioned from formalin-fixed, paraffin-embedded blocks were subjected to innumohistochemical detection of WT1 (SC-192, rabbit polyclonal 1:50; Santa Cruz Biotechnology, Santa Cruz, CA), pSmad3 (ab51177, rabbit monoclonal, 1:50; Abcam, Cambridge, MA) or type I collagen (20R-CR025, rabbit polyclonal, 1:500; Fitzgerald) with a standard protocol [20 (link)]. Briefly, after deparaffinization and rehydration, antigen was exposed by steaming with Target Retrieval Solution (DAKO/Agilent Technologies, Carpinteria, CA) and endogenous peroxidase and biotin activities were quenched with 3% H2O2 in methanol or biotin blocking solution (Life technology/Invitrogen), respectively. After application of a primary antibody overnight at 4°C, the bound antibody was amplified with goat anti-rabbit IgG (H+L) conjugated with biotin (ab3720, 1:200; Abcam) and avidin-HRP (#18–4100, eBioscience, San Diego, CA), followed by DAB reaction (Life Technology/Invivrogen) and hematoxylin counter staining. Positive staining within manually defined glomeruli (ROI) was analyzed using HistoQuest software (TissueGnositics) with the pixel characteristics defined for WT1 or pSmad3-positive (brown) and negative (blue) nuclei.
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Protein Expression Analysis in 3D Co-Culture

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For western blotting, proteins were extracted from tissues or cultured cells using RIPA buffer containing phenylmethanesulfonylfluoride (PMSF) (Beyotime, Nantong, China). Equal amounts of protein (100 µg) were separated by SDS-PAGE on a 7.5%/12.5% gel and transferred to a PVDF membrane. Primary polyclonal antibodies targeting IκBα(ab7217), IκBα s36 (ab133462), IL-6 (ab6672), TGF-β (ab2486), PAI-1 (ab142349), SMAD3 (ab40584) and p-SMAD3 s425 (ab51177) were purchased from Abcam. The secondary antibodies used were HRP-conjugated anti-rabbit or anti-mouse antibodies and were purchased from Santa Cruz Biotechnology. The blots were developed using ECL reagent (Millipore, MA, USA). An equal amount of loaded protein in each lane was confirmed using a β-actin antibody. ImageJ software was used to quantify the integrated density of the band. ELISA Levels of PAI-1, TGF-β, CCL-17, IL-6 and CCL-22 were measured in the supernatants from cell cultures with a commerical ELISA kit (Thermo Fisher; BMS2033, 88-8350-86, EHCCL17, BMS213-2 and EMCCL22). The experiments were carried out according to the manufacturer's instructions.
3D co-culture system Differentiated THP-1 and 95D cells were cultured in a 3D Petri Dish (Micro-Tissues) (RI, USA) per manufacturer's instructions. Cell culture supernatants were collected daily for seven days. The cells were then collected, washed with PBS, and stained.
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