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4 protocols using anti il 5

1

Multiparametric Flow Cytometry Analysis

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All cells were labeled with live/dead dye near infra red (Life Technologies) for dead cell exclusion and treated with Fc Block (Miltenyi, San Diego, CA, USA) prior to staining with fluorescently labeled antibodies. Anti-human antibodies used for DC staining were anti-CD83 PE (Biolegend, San Diego, CA, USA), anti-CD86-PE-Cy7 (Biolegend), anti-HLA-DR V450 (BD), and anti-CD11c APC (BD). Antibodies used in the T cell characterization were anti-LAG-3 FITC (Novus, Littleton, CO, USA), anti-PD-1 PerCP-Cy5.5, anti-CD3 Alexa700, anti-CD4 Brilliant Violet 650, anti-CD8 Brilliant Violet 570, anti-IFN-γ PE, anti-IL-5, anti-CD62L PE, and anti-CD45RA Alexa700 (all, Biolegend), anti-CD25 PE, and anti-IFN-γ PE-Cy7, anti-IL-4 PE-Cy7 (all BD), and anti-TIM-3 APC (R&D Systems). Surface staining and intracellular staining was performed using Cytofix/Cytoperm™ Plus kit (BD) according to the manufacturer’s instructions. Data acquisition was performed using the LSRFortessa flow cytometer (BD). Data analysis was performed with FlowJo version 9 (Tree Star, Inc., Ashland, OR, USA).
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2

T Cell Cytokine Profiling in IRF5 Knockout Mice

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Freshly isolated spleen-derived DO11.10 CD4+ T cells from IRF5+/+, IRF5+/−or IRF5−/−mice at 0.2×106 cells/well on 24 well plates were stimulated with 5 μg/ml anti-CD3 (145–2C11, Bio X Cell, West Lebanon, NH) and 1 μg/ml anti-CD28 (PV-1, Bio X Cell) antibody-coated wells for 72 hours. The following were assessed by ELISA: from BD biosciences: anti-IL2, biotin anti-IL2, anti-IFNγ, biotin anti-IFNγ, anti-TGFβ, biotin anti-TGFβ; from ThermoFisher Scientific: anti-IL17, biotin anti-IL17, biotin anti-IL5, anti-IL13, biotin anti-IL13; from BioLegend: anti-IL4, biotin anti-IL4, anti-IL5, anti-IL10, biotin anti-IL10. MTT assay as per manufacture instructions (MilliporeSigma).
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Flow Cytometry Analysis of Immune Cells

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Abs for FACS analysis, Fcγ receptor-blocking mAb (CD16/32; 2.4G2), FITC-conjugated anti-γδTCR (GL-3), anti-CD4 (RM4-5), anti-CD8α (53-6.7), anti-CD25 (3C7), anti-Foxp3 (MF23), anti-IL-10 (JES5-16E3), anti-IL-17A (TC11-18H10.1), anti-IL-4 (11B11) and anti-IL-2 (JES6-5H4); APC-conjugated anti-CD44 (IM7) and anti-CD3ε (145-2C11); PE-conjugated anti-CD8α (53-6.7), anti-CD25 (3C7), anti-NK1.1 (PK136), anti-IFN-γ (XMG1.2), anti-IL-10 (JES5-16E3) and anti-IL-5 (TRFK5); PerCP-conjugated anti-CD4 (RM4-5) and anti-CD8α (53-6.7) mAbs were purchased from Biolegend (San Diego, CA). Purified anti-CD3 and anti-CD28 (37.51) mAbs were obtained from BD Biosciences, (San Diego, CA).
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4

Cytokine and Transcription Factor Analysis in Immune Cells

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For measurement of intracellular cytokine expression, cells were isolated ex vivo and stimulated with 50 ng/ml PMA and 500 ng/ml ionomycin, in the presence of GolgiStop (BD Biosciences) for 3 h. Dead cells were excluded by Fixable Viability Dye eFluor 450 (eBioscience). Cells were stained with antibodies to surface antigens, and then fixed and permeabilized with the Cytofix/Cytoperm kit (BD Biosciences), followed by staining with anti-IL-5 (Biolegend) and anti-IL-13 (eBioscience).
For analysis of transcription factor expression, cells were stained with antibodies to surface antigens, then fixed and permeabilized with the Foxp3/Transcription Factor Staining Buffer Set (eBioscience) according to the manufacturer’s instructions, and stained with anti-GATA3 (eBioscience), anti-RORγt, anti-T-bet (BD Biosciences), or anti-Ki-67 (eBioscience).
For measurement of intracellular HIF1α, Lin bone marrow cells were cultured in complete media with 10 ng/ml IL-7 (Peprotech) and 10 ng/ml IL-33 (R&D Systems) for 4 days. Cells were collected and stained with antibodies to surface antigens, fixed and permeabilized with the Foxp3/Transcription Factor Staining Buffer Set (eBioscience) according to the manufacturer’s instructions, and then stained with anti-HIF1α (R&D Systems).
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