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509 protocols using pe annexin 5 apoptosis detection kit 1

1

Quantitative Annexin V-based Cell Apoptosis

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Levels of cell apoptosis was tested using BD PE Annexin V Apoptosis Detection Kit I (559763). Cells were washed cells twice with cold PBS and then resuspend cells in 1x Binding Buffer at a concentration of 1 × 106 cells/ml. Then transfer 100 μl of the solution (1 × 105 cells) to a 5 ml culture tube and add 5 μl of PE Annexin V and 5 μl 7-AAD. Gently vortex the cells and incubate for 15 min at RT (25 °C) in the dark. Add 400 μl of 1x Binding Buffer to each tube. Analyze by flow cytometry within 1 h.
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Bacterial Infection and Immune Response

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Cells were infected with 2 MOI of V. vulnificus at 37°C for 4 h. For the M1/M2 discrimination flow cytometry experiment, cells were stained with CD206-APC and iNOS-PE after fixation and permeabilization by BD Biosciences Cytofix/Cytoperm™ and perm/wash solutions. For the cell apoptosis assay, dying cell was identified by using the BD PE Annexin V Apoptosis Detection Kit I according to the manufacturer’s protocol. Data were collected by using flow cytometry.
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Annexin V-FITC Apoptosis Assay in IPEC-J2 Cells

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Apoptotic cells were detected using the PE Annexin V Apoptosis Detection Kit I (Becton, Dickinson and Company, BD Biosciences, San Jose, CA, USA) according to the manufacturer’s instructions. In brief, the IPEC-J2 cells were harvested with 0.25% trypsin without EDTA, collected in centrifuge tubes and centrifuged at 350× g at 4 °C for 10 min. The IPEC-J2 cells were washed twice in ice-cold PBS, and the supernatants were removed. Following this, 5 μL Annexin V-FITC and 5 μL 7-aminoactinomycin D were added to the cell suspension and incubated for 15 min at room temperature in the dark. Finally, 400 μL annexin V binding buffer (1×) was added to the mixture and cell apoptosis was evaluated using a CytoFlex flow cytometer (Beckman Coulter, Inc., Brea, CA, USA).
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Apoptosis Quantification in ESCC Cells

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The ESCC cells were seeded in 6-well plates, cultured in RPMI 1640 medium supplemented with 10% FBS for 24 h and then treated with cisplatin for 24 h. The apoptotic cells were double-labeled with annexin V–fluorescein isothiocyanate (FITC) and propidium iodide (PI) using a BD Pharmingen PE Annexin V Apoptosis Detection Kit I (Becton Dickinson FACSCanto II, NJ, USA) according to the manufacturer's instructions.
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5

Apoptosis Quantification in Intestinal Epithelial Cells

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Duodenal, jejunal and ileal epithelial cells were isolated, to measure the proportion of apoptotic cells by flow cytometry with a PE Annexin V Apoptosis Detection Kit I (Becton, Dickinson and Company, BD Biosciences, San Jose, CA, USA) [27 (link)]. Briefly, the excised mucosal layer of the duodenum, jejunum and ileum were isolated, and then, ground and filtered to form a cell suspension. The cells were carefully washed twice with ice-cold PBS and suspended in the PBS at 1 × 106 cells/mL. After adding 5 μL of PE Annexin V and 5 μL of 7-aminoactinomycin D (7-AAD) to a 100-μL aliquot of the cell suspension, the mixture was incubated at room temperature for 15 min in a dark room. Afterwards, 400 μL of Annexin V Binding Buffer (1×) was added, and the apoptotic cells were examined by flow cytometry (CytoFlex, Beckman Coulter, Inc., Brea, CA, USA) within 1 h.
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Quantifying Apoptosis in Jejunal Mucosa

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The proportion of apoptotic cells in isolated jejunal mucosal cells was determined by flow cytometry (CytoFlex, Beckman Coulter, Inc., Brea, CA, USA) using PE Annexin V Apoptosis Detection Kit I (Becton, Dickinson and Company, BD Biosciences, San Jose, CA, USA). First, the jejunum was dissected, the jejunal mucosa was scraped, and then filtered through a grind and a mesh to form a cell suspension. After washing twice with ice-cold PBS, the cell sample was made into a single cell suspension of 1 × 106 cells/mL. One hundred microlitre of the single cell suspension was centrifuged at 1,300 × g for 15 min to remove the supernatant, then the cells were stained with 5 μL of Annexin-V-FITC fluorescent dye at 4°C in the dark. After 10 min, add 5 μL of PI staining for 5 min at 4°C in the dark. Finally, detection of apoptotic cells was completed within 1 h after the addition of 400 μL Annexin V binding buffer (1x).
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Flow Cytometry Analysis of Cancer Cell Apoptosis

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Cell apoptosis was assessed by flow cytometry with PE Annexin V Apoptosis Detection Kit I (Becton Dickinson Biosciences, Franklin Lakes, NJ) according to the manufacturer's instructions. Briefly, cancer cells were seeded in 6‐well plates at a density of 1 × 105 cells per well. After being starved overnight, cells were treated with fresh medium containing various concentrations of TAM for 24 hours. Then cells were trypsinized, washed with phosphate‐buffered saline (PBS), and stained with PE Annexin V. The percentage of apoptotic cells was quantified by flow cytometry using a FACSCalibur instrument (BD Biosciences). The total apoptosis rate was calculated by summing the rate of early apoptotic cells (7‐AAD−/PE Annexin V+) and late apoptotic cells (7‐AAD+/PE Annexin V+).
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Quantifying Platelet Apoptosis by Flow Cytometry

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Platelet apoptosis was calculated from phosphatidylserine (PS) exposure on platelet surface using PE Annexin V Apoptosis Detection Kit I from BD (Becton Dickinson, San Jose, CA). Platelets were washed with PBS-human albumin solution and resuspended in annexin binding buffer. Platelets (1 × 106) were incubated with saturating concentrations of the Annexin-V and 7AAD antibodies and incubated for 15 min in dark conditions. After incubation, platelets were washed with annexin binding buffer and analyzed using a FACSCalibur (Becton Dickinson, San Jose, CA) and CellQuestPro software. Data analysis was performed using FlowJo software (Becton Dickinson, San Jose, CA).
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Apoptosis and Cell Cycle Analysis

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The effects of deferoxamine, deferasirox or ironomycin on apoptosis, DNA damage and cell cycle after 24 and 72 hours of treatment were determined by flow cytometry using the Apoptosis, DNA Damage, and Cell Proliferation Kit (562253, Becton Dickinson) according to the manufacturer's instructions. Annexin V-PE staining for apoptosis analysis was performed using the “PE Annexin V Apoptosis Detection Kit I” (559763, Becton Dickinson). Flow cytometry analysis was done on a Fortessa flow cytometer (BD).
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10

Culturing Primary Neutrophils with SBDS

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Primary human neutrophils were cultured in RPMI1640 medium supplemented with 10% fetal calf serum (FCS). The media contained 1% penicillin/streptomycin, and the cells were cultured at 37 °C in a 5% CO2 atmosphere. SBDS was dissolved in water and further diluted in media. Oil shale-derived SBDS was provided by the Ichthyol-Gesellschaft. PE Annexin V Apoptosis Detection Kit I was purchased from Becton Dickinson (Heidelberg, Germany). Leuko Spin medium was purchased from pluriSelect (Leipzig, Germany) and GM-CSF was purchased from Miltenyi Biotech GmbH (Bergisch Gladbach, Germany).
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