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237 protocols using l leucine

1

Nutrient Deprivation in Cell Culture

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MEF and HT1080 cells were maintained in our laboratory. These cells were cultured in DMEM medium (8122292, Gibco, Billings, MT, USA) supplemented with 10% fetal bovine serum (SH30406, Hyclone, Logan, UT, USA) and 1% penicillin/streptomycin (SV30010, Hyclone), and placed in a humidified incubator with 5% CO2 at 37 °C. In the case of arginine deprivation, cells were grown in DMEM/F-12 medium without L-arginine, L-leucine, and L-lysine (D9811-15D, US Biological, Salem, MA, USA) supplemented with 10% fetal bovine serum, 1% penicillin/streptomycin as well as 59.05 mg/L L-leucine (61-90-5, Sigma, St. Louis, MO, USA) and 91.25 mg/L L-lysine (657-27-2, Sigma). In the case of the control group with the complete medium, 59.05 mg/L L-leucine, 91.25 mg/L L-lysine, and 147.5 mg/L L-arginine (1119-34-2, Sigma) were added to the DMEM/F-12 medium without L-arginine, L-leucine, and L-lysine.
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2

Muscle Progenitor Cells Differentiation

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Primary muscle progenitor cells (MPs) were isolated from muscle tissue as described in the Supporting Information. A total of 200 000 cells were seeded in six‐well plates. Myogenic differentiation medium containing low‐glucose Dulbecco's modified Eagle medium, 2% horse serum (Invitrogen), and 1% P/S was added 24 h later. Fully differentiated MPs were treated 72 h later according to one of the following conditions: (1) STV, 1 h Dulbecco's modified Eagle medium w/o amino acids (Biomol GmbH) + 10% dialyzed fetal bovine serum (Invitrogen) + 1% P/S; (2) LEU 0.8, 1 h STV + 1 h 0.8 mM L‐Leucine (Sigma‐Aldrich); and (3) LEU 5, 1 h STV + 1 h 5 mM L‐Leucine. Experiments were performed in biological triplicate and technical duplicate. 5‐Ethynyl‐2´‐deoxyuridine (EdU) analysis was performed according to manufacturer's protocol (Thermo Fischer Scientific) after a 4 h pulse with 1 μg/mL EdU. For proliferation analysis, 20 000 cells were plated on 12‐well plates, and three plates were counted per time point over 5 days.
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3

In Vitro Analysis of Walker-256 Tumor Cells

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For in vitro studies, cells from Walker-256 tumour-bearing animals were isolated from the intraperitoneal implant and maintained in culture. Briefly, the ascites fluid from a tumour intraperitoneal implant was collected, and the erythrocytes were lysed with 55 mM NH4Cl, 12 mM NaHCO3, and 0.1 mM EDTA, and the cell suspension was centrifuged at 500 × g, for 5 min, 4 °C. The supernatant was removed, and the pellet containing the tumour cells was seeded in 199 medium (Sigma-Aldrich) supplemented with 10% bovine calf serum (Lonza) and 1% penicillin/streptomycin (Lonza) and maintained at 37 °C and 95% O2–5% CO2 atmosphere with 85% relative humidity. Lactate production and glucose consumption in vitro analyses were done as a measurement of the lactate concentration released in the medium, and the glucose consumed was measured accordingly to the manufacturer’s instructions (Bioclin, Brazil). Briefly, cells were cultured in 12-well plates and treated with 50 µM L-leucine (Sigma, USA) for 24 h. The medium was removed and assayed for lactate production1 (link) and glucose consumption2 (link). Additional Walker-256 cells were seeded in 12-well plate and treated with 50 µM L-leucine (Sigma, USA) for 24 h for mitochondrial respiratory function analyses (Seahorse), protein extraction (western blotting), and RNA extraction (qPCR).
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4

Determination of Protein Hydrolysis

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After digestion, the degree of hydrolysis of LF and the proteins in the dairy formulas was determined by the 2,4,6-trinitrobencenesulfonic acid (TNBS) method (Thermo Fisher Scientific, Rockford, IL, USA) based on the protocol by Spellman et al. (2003 (link)). TNBS was diluted to 0.1% (w/v) in distilled water. The standards were made with l-leucine (Sigma-Aldrich) at different concentrations, between 15 and 250 µM. In the case of the formulas, gastric and intestinal digests were adequately diluted to ensure that the values obtained fell within the l-leucine standard curve. The digests and standards were diluted in 1% (w/v) SDS and they were analyzed in duplicate. First, 0.25 mL of each sample was added to a tube with 2 mL of 0.2 M sodium phosphate buffer, pH 8.2. Then, 2 mL of TNBS reagent was added. Mix was incubated at 50 °C for 1 h in darkness. After incubation, and to stop the reaction, 4 mL of 0.1 N HCl was added to each tube and allowed to cool for 30 min. After this time, absorbance of the samples was measured at 340 nm.
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5

Investigating Synergistic Nutrient Effects

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Four SNC key nutritional ingredients that allowed in vitro testing were tested as single nutrients or as a mix of all four nutrients (SNCi). These nutrients were tested in a final concentration of 25 μM eicosapentaenoic acid (EPA) (Sigma-Aldrich), 12.5 μM docosahexaenoic acid (DHA) (Sigma-Aldrich), 1 mM L-leucine (Sigma-Aldrich) and 10 nM Vitamin D3 (Sigma-Aldrich or Cayman). Chosen concentrations of EPA and DHA were based on previous data showing significant increase in protein synthesis in C2C12 myotubes. L-leucine concentration of 1 mM was based on previous data showing increased protein synthesis in C2C12 myotubes. Vitamin D3 concentration of 10 nM was selected because of Salles et al. [42 (link)] showed significant increase in protein synthesis with 1 and 10 nM Vitamin D3 together with insulin and leucine as anabolic stimuli. For muscle cell assays, EPA and DHA were dissolved in 100% ethanol and further diluted in PBS + 2.5% essentially fatty acid free BSA (Sigma-Aldrich), Vitamin D3 was dissolved in 100% ethanol, L-leucine in differentiation medium. For tumor cell and organoid screening L-leucine was dissolved in PBS-Tween (0.1%); EPA, DHA and Vitamin D3 were dissolved in DMSO.
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6

Synthetic Complete Medium Preparation

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A total of 1.7 g yeast basic nitrogen source (YNB without amino acids and ammonium sulfate, BD), 5 g ammonium sulfate (VETECTM, Merck), 20 g d-glucose, 0.1 g l-arginine, 0.1 g l-cysteine, 0.1 g l-lysine, 0.1 g l-threonine, 0.05 g l-aspartic acid, 0.05 g l-Isoleucine, 0.05 g l-phenylalanine, 0.05 g l-proline, 0.05 g l-serine, 0.05 g l-tyrosine, 0.05 g l-valine, 0.05 g l-methionine, 0.1 g l-tryptophan, 0.05 g l-histidine, 0.1 g l-uracil, 0.1 g l-leucine, 0.1 g l-adenine were added to 1 L deionized H2O. All amino acids were purchased from Sigma-Aldrich. After autoclaving for 45 min, the SC medium was stored at room temperature. In all, 2% (m/v) glucose was supplemented to the medium before use.
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7

Amino Acid Standards Preparation

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L-leucine (61819) and L-isoleucine (I2752) were obtained from Sigma-Aldrich (St. Louis, MO, USA). The protein digest standard (MassPrep Mix 1) was obtained from Waters Co. (Milford, MA, USA) and consists of four tryptically-digested proteins (yeast enolase, rabbit phophorylase b, yeast alcohol dehydrogenase, and bovine serum albumin). The L-leucine and L-isoleucine standards were reconstituted to a final concentration of 10 μg/mL in high purity water (18 MΩ, Milli-Q, EMD Millipore, Billerica, MA, USA) buffered with 10 mM ammonium acetate (Sigma-Aldrich) to a pH of 6.5 (SevenEasy pH Meter, Mettler-Toledo, Columbus, OH, USA).
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8

Tamsulosin Hydrochloride Characterization

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The active ingredient of Tamsulosin hydrochloride (TMS) was purchased from Tolid Daru Pharmaceutical Co (Tehran, Iran). The citric acid (CA), Ethylenediamine (EDA), Rhodamine B (RhB), l-Cysteine (l-Cys), l-leucine (l-Lue), Creatinin, Sucrose, Glucose, Iron (ɪɪɪ) chloride, Aluminum chloride, Calcium chloride, copper (II) sulfate, Magnesium chloride, Sodium chloride, Potassium chloride, Zinc sulfate, Acetic acid, Phosphoric acid, Boric acid, and Methanol (Me-OH) with the analytical grade were purchased from Merck Co. (Darmstadt, Germany). Deionized (DI) water with a resistivity of more than 18 MΩ has been used in the whole of the experiments.
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9

Metabolite Profiling of Nutrient Mixtures

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The mixtures were prepared with the following compounds (all purchased from Merck): d-glucose, dl-proline, l-leucine, l-isoleucine, l-valine, l-phenylalanine, l-histidine, γ-aminobutyric acid, choline chloride, malic acid, citric acid, ascorbic acid, and sinigrin hydrate. The concentration of d-glucose was either 100 mM or 1000 mM while the concentration of the other compounds was 10 mM, 1 mM, or 0.1 mM. All samples were prepared in D2O with a final volume of 600 μl.
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10

Leucine Supplementation in Mice

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Mice were fed with free access to standard food (contained 15% (w/w) fat, 58% (w/w) carbohydrate, 27% (w/w) protein, ad libitum, 3.2 kcal/1 g) and tap water. In addition, l-leucine (Catalogue Number: 105360, Merck) was injected (50 mg/kg, intraperitoneal injection) once per day for 8 weeks [45 (link)].
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