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Primescript rt master mix perfect real time kit

Manufactured by Takara Bio
Sourced in Japan, China, United States

The PrimeScript RT Master Mix Perfect Real Time Kit is a reagent kit designed for reverse transcription and real-time PCR. It contains the necessary components for the rapid and efficient conversion of RNA to cDNA, as well as for the subsequent real-time amplification and detection of the target sequence.

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138 protocols using primescript rt master mix perfect real time kit

1

Quantification of miR-203 Targets in HCE-T Cells

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Forty-eight hours after transfection of miR-203 mimic and inhibitor, total RNA was extracted from HCE-T cells using TRIzol® Reagent (Invitrogen) and RNeasy Mini kit (QIAGEN). Subsequently, microarray analysis was performed using Genechip (Affymetrix, Santa Clara, CA). The relative expression levels of genes after transfection of mimic or inhibitor compare with their negative control were calculated (n = 3).
To validate the expression levels of insulin-like growth factor binding protein 5 (IGFBP5), nuclear casein kinase and cyclin dependent kinase substrate 1 (NUCKS1) and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNAs, 300 ng of template RNAs were reverse-transcribed using PrimeScript® RT Master Mix (Perfect Real Time) Kit (Takara Bio, Shiga, Japan), and real-time PCR was performed using TaqMan™ Gene Expression Master Mix (Thermo Fisher Scientific). The assay ID of TaqMan® Gene Expression Assays used as primers were following: Hs00181213_m1 (for IGFBP5), Hs05054673_s1 (for NUCKS1) and Hs02786624_g1 (for GAPDH). GAPDH was used as an internal control. Relative expression levels were calculated using standard curve method.
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2

AGP1 Antibody ELISA Analysis

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We used an AGP1 antibody (Genway; San Diego, CA, USA), enzyme-linked immunosorbent assay (ELISA) kits, Trizol reagent (Invitrogen, Grand Island, NY, USA), and PrimeScript RT Master Mix Perfect Real-Time Kit (Takara, Otsu, Japan). Real-time quantitative RT-PCR analysis was performed using SYBR RT-PCR kits (Takara).
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3

RNA Isolation, cDNA Synthesis, and RT-qPCR

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TRIzol Reagent (15596026, ThermoFisher Scientific) was used for total RNA isolation. Reverse transcription into cDNA was done using PrimeScript RT Master Mix (Perfect Real Time) Kit (RR036A, TAKARA, Kusatsu, Japan). RT-qPCR was performed by Fast SYBR® Green Master Mix (4385612, ThermoFisher Scientific) on QuantStudio 7 Flex Real-Time PCR System (4485701, ThermoFisher Scientific). The relative level was calculated using the 2−△△Ct method, and expressed as the ratio of GAPDH. The primer sequences are listed in Additional file 2: Table S2.
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4

Tilapia Testis RNA Extraction and qRT-PCR Analysis

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Total RNA (2.0 µg) was extracted from the testes of wild type and Dmrt1 mutant Nile tilapia fishes at 90 dah and subsequently was treated with DNase I to eliminate the genomic DNA contamination. The cDNA for RT-PCR examination was synthesized by using the PrimeScript RT Master Mix Perfect Real Time kit (Takara, Japan). Quantitative RT-PCR analysis of the Sox30 mRNA expression level in tilapia testis was conducted according to the instructions of the SYBR1 Premix Ex TaqTM II kit (Takara, China). The relative abundance was evaluated using the following formula as described previously [36 (link)]: R = 2−ΔΔCt. The beta-actin gene was used as a reference gene. The experiments were independently repeated three times. Primers used for RT-PCR are listed in Supplemental Table S1.
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5

Quantification of PTEN and miR-17-5p Expression

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Total RNA was extracted from HTMCs using TRIzol (Invitrogen; Thermo Fisher Scientific, Inc.), and reverse transcribed into cDNA using the PrimeScript™ RT Master Mix (Perfect Real Time) kit (Takara Biotechnology Co., Ltd., Dalian, China), then qPCR was performed using the SYBR ExScript RT-PCR kit (Takara Biotechnology Co., Ltd.) on an ABI 7300 Real-Time PCR System (Applied Biosystems; Thermo Fisher Scientific, Inc.), according to the manufacturer's protocol. The thermocycling profiles are shown in Table I. The relative expression of PTEN in each sample was normalized to the level of GAPDH using the 2−ΔΔCq method. The expression of miR-17-5p was examined using the Hairpin-it™ miRNAs qPCR Quantitation Kit (GenePharma Co., Ltd.) according to the manufacturer's protocol, and U6 (RNU6B; GenePharma Co., Ltd.) was used for normalization. Primers were synthesized by GenScript (Nanjing, China), and the sequences of the primers are shown in Table II.
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6

Heme Oxygenase-1 Pathway Regulation

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TRIzol® reagent was obtained from Nanjing KeyGen Biotech, Co., Ltd. (KGA1203; Nanjing, China); a PrimeScript® RT Master Mix Perfect Real Time kit (DRR036A) and SYBR® Premix Ex Taq™ (DRR420A) were purchased from Takara Biotechnology Co., Ltd. (DRR036A; Dalian, China); polyclonal rabbit anti-mouse HO-1 and rabbit anti-mouse CSE antibodies were obtained from Wuhan Boster Biological Technology Co., Ltd. (Wuhan, China); anti-rabbit IgG was obtained from Fuzhou Maixin Biotechnology Development Co., Ltd. (MaxVision™2; Fuzhou, China); a Takara RNA polymerase chain reaction (PCR) kit (alfalfa mosaic virus) Ver. 3.0 was purchased from Takara Biotechnology Co., Ltd.; and CoPP and ZnPP were obtained from Sigma-Aldrich (St. Louis, MO, USA).
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7

Quantitative Analysis of TRIM59 Expression

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Total RNA of each sample was isolated using TRIzol reagent (Thermo Fisher Scientific, Inc.), according to the manufacturer's protocol. The quality and concentration of extracted RNAs were identified by measuring the absorbance at 260 nm. First-strand cDNAs were generated with the PrimeScript RT Master Mix Perfect Real Time kit (Takara Biotechnology Co., Ltd.) by mixing the components and incubate at 42°C for 1 h. All qPCRs were performed with SYBR Premix Ex Taq kit (Takara Biotechnology Co., Ltd.) on an ABI PRISM 7500 Real-Time system (Thermo Fisher Scientific, Inc.). Initial denaturation took place at 95°C for 5 min, followed by annealing at 60°C for 30 sec, and a final extension at 72°C for 5 min. These conditions were cycled 40 times. The primers used are listed below, and GAPDH was included as the internal control. Each experiment was performed in triplicate at least three times. The primer sequences used are as follows: TRIM59 forward, 5′-TACGAGAGCAGCAGCTTGAA-3′; and reverse, 5′-ACGGGTTGAACCTCAGGAAG-3′; GAPDH forward, 5′-GTGGACATCCGCAAAGAC-3′; and reverse, 5′-AAAGGGTGTAACGCAACTA-3′. The sequence of the short hairpin RNAs against Trim59 were as follows: shTrim59#1, 5′-ACATTACAGGCAACCATTAAA-3′; shTrim59#2, 5′-TCCTCGTGTACTGCCATGCTCTCAT-3′; sh (negative control) NC: 5′-GGGTGAACTCACGTCAGAA-3′.
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8

Quantifying Vascular Smooth Muscle Cell Receptors

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Total RNA was extracted from VSMCs using TRIzol Reagent (Thermo Fisher Scientific, Waltham, MA, USA), according to the manufacturer’s instructions, and then the RNA was reverse transcribed using the PrimeScript RT Master Mix Perfect Real Time kit (TaKaRa, Dalian, People’s Republic of China) to obtain the cDNA. Using the cDNA as the template, a real-time PCR assay was performed using the following pairs of primers: ERα forward, 5′-CGCTTTTGAACCAGCAGG-3′ and ERα reverse, 5′-TTCCCGAGGCTTTGGTGTG-3′; ERβ forward, 5′-ATCTGTCCAGCCACGAATCA-3′ and ERβ reverse, 5′-ATTAGCACCTCCATCCAGCA-3′; GPR30 forward, 5′-AGCTCAGGCTGTATGTGGCG-3′ and GPR30 reverse, 5′-TGCTCCGTGCTGTCTGGTAT-3′; and β-actin forward, 5′-AGGCCCCTCTGAACCCTAAG-3′ and β-actin reverse, 5′-CCAGAGGCATACAGGGACAAC-3′. The 20 µL real-time PCR reaction included 0.5 µL of cDNA template, 0.25 µL of Primer F, 0.25 µL of Primer R, 10 µL of RNase-free dH2O, and 8 µL of 2.5× RealMasterMix (SYBR Green I). The reaction conditions included a predenaturation step at 95°C for 10 seconds, and 40 cycles of 95°C for 15 seconds and 60°C for 60 seconds. After the reaction, the data were subjected to statistical analysis.
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9

Quantification of Tim-3 Expression in Human Samples

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Total RNA from the human tissues and cultured cells were extracted using TRIzol solution (Takara Biotechnology Co., Ltd., Dalian, China) and quantified using a Nanodrop 2000 spectrophotometer (Thermo Fisher Scientific, Inc.). A 1 µg sample of mRNA was reverse transcribed using PrimeScript RT Master Mix (Perfect Real Time) kit (Takara Biotechnology Co., Ltd.) and qPCR was performed in an ABI PRISM 7900 Real Time system (Applied Biosystems; Thermo Fisher Scientific, Inc.) using the SYBR Premix Ex Taq kit (Takara Biotechnology Co., Ltd.). The primers used were as follows: Tim-3, forward 5′-GCTACTACTTACAAGGTCCTCAG-3′ and reverse 5′-ATTCACATCCCTTTCATCAGTC-3′; GAPDH, forward 5′-GTGGACATCCGCAAAGAC-3′ and reverse 5′-AAAGGGTGTAACGCAACTA-3′. U Initial denaturation was performed at 95°C for 30 sec, and PCR by 40 cycles of 95°C for 5 sec and 60°C for 35 sec. All experiments were performed in triplicate at least three times. Values were calculated used the 2−ΔΔCq method (25 (link))
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10

Investigating SDF-1α/CXCR4 Signaling Pathway

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TPD7 was from the Research and Engineering Center for Natural Medicine, Xi’an Jiaotong University. LEIBOVITZ’S L15 medium, MG132 and chloroquine were purchased from Sigma-Aldrich (St. Louis, MO, USA). Foetal bovine serum (FBS) was obtained from Lanzhou national hyclone Bio-Engineering Co., Ltd (Lanzhou, China). Recombinant human SDF-1α was purchased from PeproTech (Rocky Hill, NJ, USA). Antibodies against CXCR4 were obtained from Abcam (Burlingame, CA, USA). Matrix metalloproteinase (MMP)-2 rabbit mAb and MMP-9 rabbit mAb were obtained from Epitomics (Burlingame, CA, USA). p44/42 MAPK (ERK1/2) rabbit mAb and p-p44/42 MAPK (p-ERK1/2) rabbit mAb were purchased from Cell Signaling (Danvers, MA, USA). Horseradish Peroxidase (HRP)-conjugated Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) monoclonal antibody was from Proteintech Group (Chicago, IL, USA). Total RNA extraction kit was from Fastagen (Fastagen, Shanghai, China). PrimeScript RT Master Mix Perfect Real Time Kit (DRR036A) and SYBR Premix Ex Taq II were from TaKaRa (Dalian, China). Lipofectamine 2000 was from Invitrogen (Carlsbad, CA, USA). Other reagents used were analytical grades.
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