The extracted organic compounds were separated using an Agilent
7890A Series Gas Chromatograph interfaced to an
Agilent 5973c Network Mass Selective Detector and an
Agilent 7683 Series Injector (Agilent Technologies, Santa Clara, CA, USA). A 5 µL sample was injected with a split ratio of 1:5 by 0.3% standard deviation into an
HP-5MS column (30 m × 0.25 mm, 0.25 µm film thickness; Agilent Technologies, USA) using helium as the carrier gas at 1 mL/min. The ion source was maintained at 250 °C. The GC oven was programmed with a temperature gradient starting at 100 °C (for 3 min), which was gradually increased to 300 °C (for 5 min) at 8 °C/min.
MS was carried out in the electron-impact mode at an ionizing potential of 70 eV by selected ion monitoring (SIM). The presence of CoPPIX-specific
m/
z 621 ion was monitored.
The qualitative and quantitative analyses of CoPPIX were performed using synthetic CoPPIX as a standard (
Figure S1). Its concentration was determined based on the standard curve (0.08, 0.8, 1.6, 16, and 32 µM (50, 500, 1000, 10,000, and 20,000 µg/L)). A concentration curve was plotted with the peak areas corresponding to the concentration of CoPPIX tested (
Figure S2). The analysis was performed in triplicate. Error bars represented the classical standard deviation for 3 replicates. The statistical significance of the obtained results was tested using the Student’s
t-test.
Stasiuk R, & Matlakowska R. (2021). Sedimentary Cobalt Protoporphyrin as a Potential Precursor of Prosthetic Heme Group for Bacteria Inhabiting Fossil Organic Matter-Rich Shale Rock. Biomolecules, 11(12), 1913.