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Paxgene blood rna kit handbook

Manufactured by Qiagen
Sourced in Germany

The PAXgene Blood RNA Kit Handbook is a laboratory tool designed for the collection, stabilization, and purification of total RNA from whole blood samples. It provides a standardized method for the collection and storage of blood samples, ensuring the integrity of the RNA for subsequent analysis.

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2 protocols using paxgene blood rna kit handbook

1

Profiling Nonagenarian Blood Transcriptomes

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For the current study, we selected 87 unrelated nonagenarians, 337 offspring and 321 partners belonging to 281 nuclear families (Table 1). These samples were randomly selected, but in such a way that age and gender were balanced between the groups and the age range was as large as possible. Only individuals without outlying cell counts (>3 SD below or above the standard error of the mean) were included. This subpopulation is representative for the whole LLS regarding disease prevalence and parameters involved in metabolic syndrome [9 (link), 41 (link)]. From these non-fasted individuals, peripheral blood was harvested using PAXgeneTM tubes (Qiagen, Venlo, The Netherlands). The tubes were frozen and kept at −20 °C for ~3–5 years. After thawing at room temperature for at least 2 h, total RNA was extracted from the approximately 2.5 ml of peripheral blood in each tube following the manufacturer’s recommended protocol (PAXgene Blood RNA Kit Handbook, Qiagen, Venlo, The Netherlands). The quality and integrity of the total RNA was evaluated on the 2100 Bioanalyzer (Agilent Technologies, Amstelveen, The Netherlands) and the concentration was measured using a NanoDrop spectrophotometer (NanoDrop Technologies, Wilmington, DE, USA). Quality criteria included a 28S/18S ratio, as measured by the 2100 Bioanalyzer, of at least 1.2, and a total RNA yield of at least 3 μg.
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2

RNA Extraction and Library Preparation

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The frozen blood samples were returned to room temperature, and total RNAs were extracted according to the instructions of the PAXgene Blood RNA Kit Handbook (QIAGEN, Germany). The RNA concentration was determined using the Nanodrop spectrophotometer (ThermoFisher Scientific, USA). Total RNAs were used to deplete rRNAs by Ribo-Zero Gold (Illumina, USA) to be ready for whole transcriptome libraries and sequencing. NEBNext Ultra RNA Library Prep Kit (NEB, USA) was used for constructing whole transcriptome libraries. BioAnalyzer 2100 system was used for quality control, and qPCR (Bio-RAD, USA) was used for quantifying of the whole transcriptome libraries. Total RNA extraction and whole transcriptome library construction were performed by the Annoroad Gene Technology Co., Ltd. (Beijing, China). RNA libraries were established and sequenced as 150-bp paired-end reads applying the HiSeq X ten.
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