chambered slides and cultured for 24 hr. The cells were transfected, allowed to
recover for 24 to 36 hr, and then treated with ShhN-CM or other compounds, as
indicated. For visualizing ciliary proteins, the transfected cells were starved
in DMEM containing 0.5% FBS for 24 hr before other treatments. The cells were
fixed with 4% paraformaldehyde for 10 min at 4°C, and standard procedures
for immunostaining were followed. The primary antibodies used were rabbit
anti-Caveolin-1 (1:1000; Sigma-Aldrich (St. Louis, MO)), rabbit anti-Clathrin
heavy chain (1:200; Cell Signaling Technology (Danvers, MA)), rabbit anti-Rab5
(1:150, Cell Signaling Technology), rabbit anti-Rab7 (1:50, Cell Signaling
Technology), rabbit anti-Lamp1 (1:150; Sigma), mouse anti-acetylated Tubulin
(1:2000; Sigma), rabbit anti-Gli3 (1:500; R&D (Minneapolis, MN)), and
rabbit anti-Smo (1:500; a gift from Dr Rajat Rohatgi). Alexa-coupled secondary
antibodies were purchased from Life Technologies Corp.