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4 protocols using anti rip1 610459

1

Apoptosis pathway antibody panel

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TNF-α and z-VAD-fmk were purchased from R&D. Cyclohexamide (CHX) from Sigma. Smac mimetic was a gift from S. Wang (University of Michigan, Ann Arbor, Michigan, USA). TRAIL from Novoprotein. FasL from Upstate Biotech. CH11 from MBL Medical and Biol Lab.
All antibodies are at concentration of 1 μg ml−1 and used at 1:1,000 dilution unless otherwise stated. Anti-RARγ (C-15) (sc-550) for human, anti-RARα (C-20) (sc-551), anti-caspase-8 (C-20) (sc-6136), anti-cIAP2 (sc7944) and anti-Fas (C-20) (sc-715) from Santa Cruz; anti-RIP1 (610459) and anti-FADD (610400) from BD Biosciences; anti-RARγ1 (ab5905) for mouse, anti-RIP3 (ab72106), anti-MLKL (ab184718) for human, anti-MLKL (ab172868) for mouse and anti-cIAP1 (ab2399) from Abcam; anti-RIP3 (2283) for mouse from ProSci, anti-TRADD (05-473) from Upstate; anti-TRAF2 (MAB3277) and anti-TNFR1 (AF-425-PB) from R&D; anti-Actin (A3853) (dilution 1:10,000), anti-FLAG (F9291) (dilution 1:5,000) and anti-GFP (G6539) (dilution 1:5 000) from Sigma; anti-V5 (R960-25) (dilution 1:5,000) from Invitrogen; anti-PARP1 (BML-SA250-0050) from Enzo Life Science; anti-GAPDH (NB300-22) (dilution 1:5,000) from Novus Biologicals; anti-cleaved caspase-8 (9496), anti-CYLD (4495), anti-RIP1 (137451) and anti-p-RIP1(65746) from Cell Signaling Technology; anti-DsRed (632392) (dilution 1:5,000) from Clontech.
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2

TNF-induced cell death pathway

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The Z-VAD and Smac mimetic were used as described previously (Wang H. et al., 2014 (link)). Recombinant TNF was purified in our laboratory, AP20187 (HY-13992) was purchased from MCE. ICP6 polyclonal antibodies can be obtained by injecting His-ICP6 (1-177 amino acids) expressed in E. coli into rabbits. The following antibodies were used in this study: anti-Flag M2 (F3165), anti-Myc (SAB4700448) (Sigma); anti-RIP1 (610459) (BD Biosciences); anti-RIP1 (D94C12), anti-phospho-RIP1 (65746S) and anti-hRIP3 (13526S) (Cell Signaling Technology); anti-FKBP (ab108420) (Abcam); and anti-actin (PM053-7) (MBL).
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Western Blotting for Apoptosis Signaling Proteins

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Western blotting followed by enhanced chemiluminescence detection was performed as previously described.24 (link) In some experiments, cell culture supernatants were also collected for the detection of HMGB1 or GAPDH. The following antibodies were used: Anti-TAK1 (4505), anti-phospho-TAK1 (Thr187; 4536), anti-α tubulin (3873), anti-HMGB1 (3935), anti-PARP (9532), anti-caspase 8 (4790), anti-cleaved caspase 8 (9429), anti-caspase 3 (9662), anti-RIP1 (3493), anti-CYLD (8462), anti-TRADD (3694), anti-cIAP1 (4952), and anti-FLIP (8510) were from Cell Signaling Biotechnology (Beverly, MA, USA); anti-RIP3 (sc-135171), anti-FADD (sc-6036), anti-CYLD (sc-74435), anti-IκBα (sc-847), anti-p65 (sc-372), anti-cIAP2 (sc-7944), and anti- GAPDH antibodies were from Santa Cruz Biotechnology (Santa Cruz, CA, USA); anti-RIP1 (610459) was from BD Biosciences; anti-FLIP (XA-1008) was from ProSci (Poway, CA, USA); anti-FADD (AD-I-AAM-212-E) was from Enzo Life Sciences (Farmingdale, NY, USA).
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4

Antibody Characterization for Cell Signaling

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Anti-mRip3, p-Rip3, Fadd and Mlkl antibodies were described previously19 (link). Anti-Ppm1b antibody was raised in rabbit using GST-tagged full-length human Ppm1b-L as the antigen. Anti-human Rip3 (ab72106, dilution 1:1,000) and anti-Ppm1a (ab14824, dilution 1:1,000) antibodies were from Abcam. Anti-Flag (F7425, dilution 1:500), Myc (A7470, agarose affinity gel) and HA (A2095, agarose affinity gel) antibodies were obtained from Sigma. Anti-Myc (sc-40, dilution 1:500), HA (sc-805, dilution 1:500) and anti-β-actin (sc-47778, dilution 1:10,000) antibodies were obtained from Santa Cruz Biotechnology. Anti-Rip1 (610459, dilution 1:1,000) antibody was obtained from BD Biosciences. Anti-Gapdh (60004-1-Ig, dilution 1:2,000) and anti-Canx (10427-2-AP, dilution 1:500) antibodies were from Proteintech. Anti-p-p65 (3033s, dilution 1:1,000), p65 (8242s, dilution 1:200), p-p38 (9216S, dilution 1:1,000), p38 (9212s, dilution 1:200) and H3 (9715, 1:5,000) antibodies were obtained from Cell Signaling Technology. Mouse TNFoc was purchased from eBioscience. zVAD was obtained from Calbiochem. Propidium iodide (PI), 4-hydroxytamoxifen (4-OHT) and Protease Inhibitor Mix were from Sigma. λ-phosphatase (λ-Ppase) was from NEB. AP21967 (A/C Heterodimerizer) was obtained from ARIAD Pharmaceuticals.
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