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6 protocols using anti actin clone ac 40

1

Antibodies for Signaling Pathway Analysis

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Rabbit antibodies for GEF-H1, myosin phosphatase targeting protein 1 (MYPT1), phospho-MYPT1 (Thr696), Akt, phospho-Akt (Ser473), FoxO1, phospho-FoxO1, PPARγ, and C/EBPα were obtained from Cell Signaling Technology, Inc. (Danvers, MA). Rabbit polyclonal anti-GEF-H1 antibody was also purchased from Abcam (Cambridge, UK) and used for immunostaining. Mouse monoclonal anti-tubulin (clone TUB 2.1) and anti-actin (clone AC-40) antibodies and sucralose were obtained from Sigma (St. Louis, MO). Sodium saccharin, cholera toxin and Y-27632 were from Wako Pure Chemical Industries (Osaka, Japan).
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2

EGF-induced EGFR phosphorylation assay

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Cells were serum starved overnight. Cells were then pre-treated with the indicated molecules at 10 μM for 1h. They were then stimulated with Human EGF at 50 ng/ml final for 10 min.
Cells were lysed in Laemmli 2,5 × buffer containing beta-mercaptoethanol. Samples were then loaded on acrylamide gels (Criterion TGX, BioRad) and transferred on nitrocellulose membrane (GE Healthcare) using Power blotter Semi dry from Thermo Scientific. Blocking and incubation of antibodies were performed in PBS supplemented with 0.1% Tween and 5% milk. Detection was performed using SuperSignal West Pico Substrate from Thermo and Chemidoc machine (BioRad).
Human EGF was purchased from Sigma-Aldrich (catalog number E9644).
Antibodies to detect phosphorylated EGFR and total EGFR were purchased from Cell Signaling Technology (PhosphoPlus EGFR (Tyr1068) Antibody Duet, catalog number 11862S, dilution 1:1000). Anti-actin (clone AC40) used as loading control was purchased from Sigma Aldrich (catalog number A3853, dilution 1:1000). Secondary anti-mouse and anti-rabbit poly-HRP antibodies were purchased from Thermo Scientific (dilution 1:10000).
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3

Immunological Detection of SBV Proteins

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SBV infection was detected using a rabbit polyclonal antiserum raised against the SBV N protein expressed as a His-tagged recombinant protein from baculovirus in insect cell line Sf9 (Western blotting [WB], 1:1,000; immunofluorescence [IF], 1:500) (UMR1161 Virology, ANSES, Maisons-Alfort, France). N and NSs proteins expressed in fusion downstream of EGFP were detected using mouse monoclonal anti-GFP antibody (Roche Life Science; reference no. 11814460001 [WB, 1:2,000]). Monoclonal anti-B23 (reference no. B0556 [WB, 1:10,000; IF, 1:1,000]) and antiactin (clone AC-40; reference no. A3853 [WB 1:2,500]) antibodies were purchased from Sigma-Aldrich. Mouse monoclonal antibody against fibrillarin used in this study was from Abcam (IF, 1:250). Mouse anti-Rpb1 monoclonal antibody was purchased from Ozyme (clone 8WG16; reference no. BLE92010 [WB, 1:500; IF, 1:250]).
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4

Antibody Characterization for PTPε and RPTPα

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Polyclonal antibodies used included anti-PTPe (Elson and Leder, 1995b (link)), which cross-reacts with RPTPa; anti–phospho-PTPe, which reacts specifically with PTP ε phosphorylated at its C-terminal tyrosine residue (Y638 in cyt-PTPe = Y695 in RPTPe; Berman-Golan and Elson, 2007 (link)) and cross-reacts with RPTPa phosphorylated on its C-terminal Y789; and anti-pY416 Src (Cell Signaling Technology, Danvers, MA). Monoclonal antibodies used included anti–v-Src (clone 327; Calbiochem, San Diego, CA), anti–α-tubulin (clone DM1A; Sigma-Aldrich, St. Louis, MO), and anti-actin (clone AC-40; Sigma-Aldrich). Horseradish peroxidase (HRP)–conjugated secondary antibodies for protein blotting were from Jackson Immuno­Research Laboratories (West Grove, PA). Enhanced chemiluminescence reagents were from Biological Industries (Beit Haemek, Israel).
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5

Biotinylation of Cell Surface Proteins

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3×100mm dishes of HEK293 cells were transfected with 2.5μg DNA for each separate construct/dish. Cells were collected 48h post-transfection, washed three times with PBS. Biotinylation was performed in 10 mL ice-cold PBS containing 0.25 mg/mL sulf-NHS-SS-Biotin for 30 minutes at 4°C. 10mM glycine was added to quench the reaction. Cell lysis solution contained (in mM/L) 50 HEPES (pH 7.4), 150 NaCl, 1.4 MgCl2, 1 EGTA, 10% Glycerol, 1% triton X-100, 1.2mg/mL N-Ethyl-maleimide with protease inhibitors. NeutrAvidin Agarose was used to pull down labeled proteins. Eluted proteins were then used for Western blotting as previously described,11 (link) and blotted using a sodium channel antibody (Millipore Polyclonal Anti-Na+ Channel III–IV loop). Pan-cadherin (Cell Signaling Technology) was used as a loading control for the cell surface biotinylated fraction and actin (Sigma-Aldrich monoclonal Anti-Actin, Clone AC-40) was used as a negative control for the cell surface biotinylated fraction. To determine the protein expression level, the sodium channel bands were normalized to the control bands (actin for total lysate and Pan-cadherin for biotinylated fractions).
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6

Antibody-based Detection of nAChR and GluR Subunits

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For the detection of nAChR subunits we used affinity-purified, subunit-specific, polyclonal antibodies (Abs), produced in rabbit against peptides derived from the intracytoplasmic loop (CYT) of nAChR subunits [27] . For the GluR subunits we produced Abs directed against the COOH peptide (EGYNVYGIESVKI) of the GluA2/3 subunit and of the Nterminal peptide (RTSDSRDHTRVDWKR) of the the GluA1 subunit. The specificity of the affinity-purified Abs was tested by western blotting studies using β2 WT and β2 KO mouse cortex extracts cDNAs (supplementary Fig. 1) or using cells transfected and non-transfected with GluA1, GluA2 and GluA3 cDNAs (supplementary Fig. 2).
The anti-GluN2B (clone N59/20), anti-PSD95 (clone K28/43) and anti-SAP102 (clone N19/2) Abs were from Antibodies incorporated (Davis, CA, USA); anti-GluN1 (clone 54.1) was from BD Pharmingen (Franklin Lakes, NJ, USA); anti-GluN2A (clone A3-2D10) was from Life technologies (Waltham, MA, USA); anti-mGluR5 was from Millipore (Billerica, MA, USA); anti-mGluR2 (clone mG2Na-s) was from Abcam (Cambridge, UK) and anti-actin (clone AC-40) was from Sigma-Aldrich (St. Louis, MO, USA).
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