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9 protocols using annexin 5 pi staining kit

1

Characterizing Kidney Cell Populations

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Kidney tissue was dissected into small pieces and gently minced by gentleMACS Dissociator (Miltenyi Biotec GmbH, Bergisch Gladbach, Germany) in Hank’s buffer containing 10% type IV collagenase (Gibco). Red blood cells were lysed in both kidney and blood samples. Single cells were divided into groups and stained by fluorescence-conjugated antibodies including CD45-APCCy7 (BD Pharmingen, San Diego, CA, USA), CD11b-APC (BD), FPR2-AF647 (Bioss, Beijing, China), CD86-BB700 (Novus), CD163-AF405 (BD), and CD62L-BV421 (BD) for 30 min in staining buffer (BioLegend, San Diego, CA, USA). Neutrophil Elastase-PE (Bioss), MPO-FITC (BioLegend), and CD68-PE (Invitrogen) were stained after fixation/permeabilization using fixation and fixation/permeabilization buffer (BioLegend) according to the manufacturer’s protocols. Apoptosis assay was conducted using commercially available Annexin V/PI staining kit (Beyotime) according to the manufacturer’s instructions. Experimental data were acquired using FACS Aria III (BD Biosciences, San Jose, CA, USA) and analyzed by Flow Jo X (BD Biosciences).
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2

Multiparametric analysis of TCMK-1 cells

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TCMK-1 cells were cultured in six-well plates and harvested using trypsin without EDTA before and after staining. Cellular ROS, mitochondrial ROS, apoptosis, and MMP were determined using a Reactive Oxygen Species Assay kit (Beyotime Institute of Biotechnology, Shanghai, China), MitoSOX kit (Life Technologies, Carlsbad, CA, USA), Annexin V-PI staining kit, and JC-1 detection kit ((Beyotime Institute of Biotechnology, Shanghai, China), respectively. The cells were then stained according to the respective manufacturer’s instructions and analyzed via flow cytometry. Ten thousand events were recorded using the FACSCalibur system (BD Biosciences, CA, USA), and the resulting data were analyzed using FlowJo software.
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3

Characterizing MSC Surface Markers and Apoptosis

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To characterize the expression of surface markers, the MSCs were immune-stained and detected by flow cytometry analysis. Antibodies used in this detection are anti-CD73-PE, anti-CD90-FITC, anti-CD105-PE, anti-CD14-FITC, anti-CD34-FITC, anti-CD19-PE, anti-CD45-APC and anti-HLA-DR-PE (Biolegend, San Diego, CA, USA).
To assess the apoptotic rates, H9c2 cells were seeded in a 6-well plate at 30,000 cells/well for 24 h and then desired treatments were performed for 24 h. Cells were stained using an Annexin V/PI staining kit (Beyotime, Shanghai, China) following the manufacturer’s instructions and detected by flow cytometry (BD Biosciences, Franklin Lakes, NJ, USA).
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4

Annexin V-FITC/PI Apoptosis Assay

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Apoptosis detection was performed using an Annexin V/PI staining kit (Beyotime, China). Briefly, 0.5 mL cell suspension (1 × 106cells/mL) was washed with PBS for twice and centrifuged at 1200 rpm for 5 min; after the supernatant was discarded, 210 μL working solution containing 5 μL Annexin V-FITC and 10 μL PI was used to gently re-suspend the cell sedimentation evenly. Next, the cell suspension was incubated at 4℃ for 20 min; then, the samples were diluted with PBS to the volume of 500 μL and filtered with 100 μm cell strainer for the final flow cytometry detection (FACS Calibur, BD, USA).
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5

Annexin V/PI Cell Apoptosis Assay

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Cells cultured in medium and digested with trypsin were collected. The Annexin V/PI staining kit (Beyotime, Shanghai, China) was utilized to label cells according to the manufacturer's protocol. After filtering through 50 µm mesh, cells were analyzed with EXFLOW flow cytometer (DAKEWE, Shenzhen, China).
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6

Cytotoxicity Assessment of TALL-104 and NK-92MI Cells

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C918 and IL-6/C918 cells were seeded into 6-well plates at a density of 1 × 105 cells per well, and then TALL-104 and NK-92MI cells pretreated with 100 IU/mL IL-2 were introduced into each well, and co-cultured with C918 and IL-6/C918 cells at effector/target cell ratio of 5:1 for 24 hours.16 (link),23 (link) After co-culture, wells were extensively washed to eliminate dead cells and effector cells, then the adherent C918 and IL-6/C918 cells were harvested and analyzed by using the Annexin V/PI staining kit (Beyotime, Shanghai, China). When specified, IL-6/C918 and C918 cells were pretreated with sodium oxamate and lactate, respectively.
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7

Cell Viability and Apoptosis Assays

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Cell viability was assessed by a cell counting kit 8 (CCK-8; ApexBio, Houston, USA) assay according to the manufacturer’s protocol. The inhibition rate was calculated as follows: inhibition rate (x) = (ODcontrol - ODx)/ODcontrol. A Live/Dead cell staining kit (Yeasen) consisting of Calcein-AM (green fluorescence) and propidium iodide (PI, red fluorescence) and Annexin V/PI staining kit (Beyotime, Shanghai, China) was used according to the instructions to assess cell apoptosis.
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8

Quantifying HSV-1 Induced Apoptosis in HCECs

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HCECs were cultivated in six-well plates for 24 h at a density of 5 × 105 cells per well. The cells were pretreated with BCA for 12 h and then infected with HSV-1 for an additional 2 h. Following the manufacturer’s instructions, the Annexin V/PI staining kit (Beyotime) was used to assess the amount of apoptosis that occurred in the treated cells. BD Accuri C6 (BD, San Jose, CA, USA) was used to detect the total number and percentage of apoptotic cells, and FlowJo V10 (FlowJo, LLC, Ashland, OR, USA) was utilized to analyze the data.
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9

Quantifying Myoblast Apoptosis and Mitochondrial Dynamics

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An Annexin V/PI Staining Kit (Beyotime, C1062) was used to quantitatively detect myoblast apoptosis as described.[ 19 ] A MitoProbe Transition Pore Assay Kit (Thermo Fisher, M34153) was used to measure mitochondrial permeability transition pore (MPTP) opening according to the manufacturer's instructions as described. [ 20 ] Accuri C6 flow cytometer (BD Biosciences, USA) was used to detect fluorescence intensity. A minimum of 1 × 10 4 cells was recorded in each sample and analyzed with FlowJo software (version 7.6.2, FlowJo LLC, USA).
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