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Sensimix sybr reagent

Manufactured by Meridian Bioscience
Sourced in United States

SENSIMIX SYBR is a ready-to-use reagent for real-time quantitative PCR (qPCR) analysis. It contains all the necessary components for the amplification and detection of DNA targets using SYBR Green chemistry.

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3 protocols using sensimix sybr reagent

1

Melanoma Gene Expression Profiling

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RNA was isolated using TRIZOL® (Invitrogen, Carlsbad, CA, USA) and quantitative real time PCR performed using SENSIMIX SYBR reagent (Bioline, Boston, MA, USA). Expression levels were quantified relative to GAPDH via the Livak method. Following primer sequences were used: MITF CCGTCTCTCACTGGATTGGT, TACTTGGTGGGGTTTTCGAG; TRPM1 CACCCAGAGCTACCCAACAGA, CGGATATACATGGCTTTATTGG; PMEL CTGGATGGTACAGCCACCTT, GGCACTTTCAATACCCTGGA; TYR CTGGAAGGATTTGCTAGTCCAC, CCTGTACCTGGGACATTGTTC; MLANA TCTGGGCTGAGCATTGGG, AGACAGTCACTTCCATGGTGTGTG; CDK2 ATGGAGAACTTCCAAAAGGTGGA, CAGGCGGATTTTCTTAAGCG; CCND1 GAACTACCTGGACCGCTTCCT, TTCGATCTGCTCCTGGCAGG; BCL2A1 CGTAGACACTGCCAGAACACTA, GGGCAATTTGCTGTCGTAGA; CTGF CGACTGGAAGACACGTTTGG, ATCCCACAGGTCTTGGAACA; NEGR GGTCAGTGGATCCTCGAGTT, TGGGCCATCATCTGTCACAT; CYR61 TGCGAAGATGGGGAGACATT, CTGTAGAAGGGAAACGCTGC; CTGF-promoter GCCAATGAGCTGAATGGAGT, CAATCCGGTGTGAGTTGATG; CYR61-promoter AGCAAACAGCTCACTGCCTT, ATGGTAGTTGGAGGGTCGTG; MITF-promoter GCAGTTATTCGGCCATTGGA, GGAAGCCCTACGAGTTTGGT.
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2

CYBB mRNA Quantification via qPCR

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The level of CYBB mRNA was quantified using two different primer pairs, compared with the level of the endogenous control, β-Actin (Eurogentec), and expressed as relative quantities compared with the WT cell line using the ΔΔCT method [21] (link). Primers used included gp91 exon 1 forward (CAACACATTCAACCTCTGCC), gp91 exon 3 reverse (GGACAGCAGATTTCGACAG), gp91 exon1-2 boundary forward (TTTTGTCATTCTGGTTTGGCTG), and gp91 exon 2-3 boundary reverse (CCAGTGCTGACCCAAGAAGT). Reactions were carried out in triplicate on an ABI StepOne Plus qPCR machine using SensiMix SYBR reagent (Bioline).
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3

Quantitative Real-Time PCR Analysis of Melanoma Genes

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RNA was isolated using TRIZOL® (Invitrogen, Carlsbad, CA, USA) and quantitative real-time PCR performed using SENSIMIX SYBR reagent (Bioline, Boston, MA, USA). Expression levels were quantified relative to glyceraldehyde 3-phosphate dehydrogenase via the Livak method. The following primer sequences were used: MITF, 5′-CCGTCTCTCACTGGATTGGT-3′, 5′-TACTTGGTGGGGTTTTCGAG-3′; TRPM1, 5′-CACCCAGAGCTACCCAACAGA-3′, 5′-CGGATATACATGGCTTTATTGG-3′; PMEL, 5′-CTGGATGGTACAGCCACCTT-3′, 5′-GGCACTTTCAATACCCTGGA-3′; TYR, 5′-CTGGAAGGATTTGCTAGTCCAC-3′, 5′-CCTGTACCTGGGACATTGTTC-3′; MLANA, 5′-TCTGGGCTGAGCATTGGG-3′, 5′-AGACAGTCACTTCCATGGTGTGTG-3′; CDK2, 5′-ATGGAGAACTTCCAAAAGGTGGA-3′, 5′-CAGGCGGATTTTCTTAAGCG-3′; CCND1, 5′-GAACTACCTGGACCGCTTCCT-3′, 5′-TTCGATCTGCTCCTGGCAGG-3′; BCL2A1, 5′-CGTAGACACTGCCAGAACACTA-3′, 5′-GGGCAATTTGCTGTCGTAGA-3′; CTGF, 5′-CGACTGGAAGACACGTTTGG-3′, 5′-ATCCCACAGGTCTTGGAACA-3′; NEGR, 5′-GGTCAGTGGATCCTCGAGTT-3′, 5′-TGGGCCATCATCTGTCACAT-3′; CYR61, 5′-TGCGAAGATGGGGAGACATT-3′, 5′-CTGTAGAAGGGAAACGCTGC-3′; CTGF promoter, 5′-GCCAATGAGCTGAATGGAGT-3′, 5′-CAATCCGGTGTGAGTTGATG-3′; CYR61 promoter, 5′-AGCAAACAGCTCACTGCCTT-3′, 5′-ATGGTAGTTGGAGGGTCGTG-3′; MITF promoter, 5′-GCAGTTATTCGGCCATTGGA-3′, 5′-GGAAGCCCTACGAGTTTGGT-3′.
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