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10 protocols using detection antibody

1

Murine Cytokine Quantification by ELISA

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Murine cytokines were measured using a standard sandwich ELISA methods, as previously described [18] (link), [19] (link). The capture antibodies, detection antibodies and recombinant cytokines were purchased from R&D Systems. The ELISAs used in this study did not cross-react with other known murine cytokines. For lung cytokine measurements, lungs were homogenized in PBS containing 0.1% TritonX-100 and complete protease inhibitor (Roche) and centrifuged; the cleared supernatants were harvested and used for ELISAs.
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2

Measuring Cytokines and Chemokines by ELISA

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The concentration of cytokines and chemokines in peritoneal lavage fluids or culture supernatants were measured by a standard method of sandwich ELISA, as previously described6 (link),43 (link). Captured antibodies, detection antibodies and recombinant cytokines were purchased from R&D Systems (Minneapolis, MN). ELISAs employed in this study did not cross-react with other murine cytokines available.
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3

Biomarkers of Chronic Inflammation Analysis

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Plasma concentrations of KIM-1, as well as tumor necrosis factor receptors 1 and 2 (TNFR1 and TNFR2) as markers of chronic inflammation, were measured using a microbead-based assay as described previously.5 (link) Samples were diluted ten-fold in sample diluent buffer (0.1M HEPES, 0.1M NaCl, 0.1% Tween-20 and 1% BSA; pH 7.4; filter sterilized), and 30 μL of diluted sample, recombinant standards and internal control samples were incubated with ~6000 microbeads that were coupled with KIM-1, TNFR1 and TNFR2 capture antibodies for 1 h (R&D Systems). After incubation, microbeads were washed 3X with PBST and incubated with corresponding detection antibodies (R&D Systems) for 45 min. After incubation, beads were washed 3X with PBS-Tween and incubated with Streptavidin-PE (Invitrogen) for 15 min. The signal from the fluorochrome, which is directly proportional to the amount of antigen bound at the microbead surface, was captured using the Bio-Plex system (Bio-Rad). The lower level of detection (LLOD) for KIM-1, TNFR1 and TNFR 2 were 1.02 pg/mL, 0.67 pg/ml, and 0.17 pg/ml, respectively and this value was assigned to all samples where analytes were not detected. As a marker of kidney function, we used creatinine mass spectrometry measurements12 (link) conducted in the context of previous studies.11 (link)
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4

Cytokine Production in Macrophages

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Culture supernatants were collected from THP-1 cells and PMA-derived macrophages after stimulation with PGE-2, LPS, and pLTA. To block the signaling pathways, NF-κB (Cat# 481406), ERK (Cat# 328006), JNK (Cat# 420119), and p38 (Cat# 559389) inhibitors (MERCK, Darmstadt, Germany) were pretreated for 30 min prior to stimulation with ligands. To perform a standard sandwich ELISA in 96-well immune plates, human IL-10 and TNF-α were captured with antibodies (purchased from R&D Systems, USA) and incubated at room temperature (RT) overnight. Plates were blocked with blocking buffer (5% sucrose, 1% BSA, 0.05% NaN3 in PBS) for 2 h, and supernatants were added to each well. After incubation, the plates were washed with washing buffer (0.05% Tween 20 in PBS), and detection antibodies (R&D Systems) were added and incubated for 2 h. After washing, HRP was added and incubated for 20 min. After washing, substrate reagents were added, and the results were measured at wavelengths of 450 nm/550 nm.
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5

IFN-β Quantification by ELISA

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Supernatants were collected at 8h and 24h and analyzed using ELISA for IFN-β. Briefly, Nanopore Maxisorp 96-well plates were coated with 50 μl of capture antibody diluted 1:500 (Santa Cruz, #sc-57201) in 0.1M carbonate buffer and were incubate 4°C overnight. Samples were then blocked using PBS+10%FBS for 2h at 37°C. Samples were loaded at a 1:4 dilution for a total of 50 μl added to each well. Standard (PBL, 12400-1) was diluted 1:4 for serial dilutions and incubated at room temperature overnight. Samples were washed with PBS+0.05% TWEEN before each step. Detection antibody (R&D Systems, 32400-1) was added at a 1:2000 dilution and incubated at room temperature overnight. After washing, secondary antibody (Cell Signaling Technology, 7074) was added at a 1:2000 dilution and incubated for 3h. Following washes, TMB substrate (SeraCare) was added and the reaction was stopped with 2N H2SO4. ELISA was read at 450nm.
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6

Quantification of Mouse Cytokines

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The mouse IL-1β and IFN-β levels were determined using DuoSet ELISA Kits (R&D). Reagents for mouse IL-18 ELISA: capture antibody (R&D, D047-3), detection antibody (R&D, D048-5), and recombinant mouse IL-18 standards (R&D, B004-5).
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7

Murine TNFα Quantification by ELISA

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Murine TNFα was measured using a standard sandwich ELISA as previously described40 (link),41 (link). The primary antibody, detection antibody, and recombinant TNFα were purchased from R&D Systems. The ELISAs employed in this study did not cross-react with other murine cytokines available.
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8

TGF-beta Receptor III ELISA Protocol

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Twenty-five thousand cells were plated in six-well dishes and transfected the next day. After 24 h, medium was removed and replaced with 1 ml of full growth medium. Culture medium was allowed to condition for 24 h (unless otherwise indicated) and then was removed and immediately spun down at 4°C to pellet dead cells and debris. Cleared medium was aliquoted and immediately placed at –80°C. For the TβRIII ELISA, capture antibody (R&D Systems) was immobilized onto an E1A/R1A plate (Corning, Corning, NY) overnight. After washing, samples were loaded onto plate and incubated at room temperature for 2 h. Then detection antibody (R&D systems) was applied and incubated for 2 h, followed by streptavidin–horseradish peroxidase (HRP) R&D systems) incubation for 30 min. Finally, Fast OPD substrate (Sigma-Aldrich, St. Louis, MO) was added, 3 M HCl was applied to stop reaction 30 min later, and optical absorbance at 490 nm was recorded immediately.
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9

Serum Inflammatory Markers After I/R

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Blood was collected from mice after intestinal I/R, allowed to clot on ice at least 30 min and whole serum collected by centrifugation for 20 min at approximately 1000×g. Serum MPO activity and serum C5a level were determined based on the sandwich ELISA principle. The mouse MPO and C5a capture antibody, detection antibody, standard, and Streptavidin-HRP were purchased from R&D SYSTEMs.
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10

Proteomic Analysis of Whey Protein

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The spray-dried WPC that was used in this study (Wheyco GmbH, Hamburg, Germany) was reported to contain 79.8% proteins, 4.2% water, 9.5% lactose and 5.8% fat. NuPAGE® 12% Bis-Tris Gels, running buffer, washing buffer and sample buffer for SDS-PAGE were provided by Life Technology (Carlsbad, USA). A molecular marker set of 9-170 kDa was obtained from Jena Bioscience (Jena, Germany). Antibodies used in ELISA analyses were provided by Abcam (Cambridge, UK). Anti-RAGE, the monoclonal mouse IgG 2B human RAGE antibody (MAB11451) and the detection antibody were obtained from R&D systems (Minneapolis, USA). The polyclonal goat anti-mouse HRP-conjugated antibody (P0447) was obtained from DAKO (Glostrup, Denmark). All the other chemicals were from Sigma-Aldrich (Zwijndrecht, The Netherlands).
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