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7 protocols using harry s hematoxylin

1

Immunocytochemical Analysis of Cell Signaling

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Immunocytochemistry analysis was performed on coverslip-adherent cells by the labeled streptavidin biotin method using a LSAB kit (DAKO Japan, Kyoto, Japan). The samples were incubated with 0.1% Triton X-100 solution for 1 h, washed 3 times in PBS and treated for 40 min at room temperature with 10% BSA. In addition, coverslips were incubated overnight at 4 °C with the primary antibodies (anti-p53, anti-p65-NF-kB, anti-TGF-β1, diluted 1:400 and anti-Nrf2, diluted 1:300, Santa Cruz Biotechnology). Next, secondary antibody treatment was performed (2 h at room temperature), and horseradish peroxidase activity was visualized by treatment with H2O2 and 3,3′-diaminobenzidine (DAB) for 5 min. For the final step, the sections were weakly counterstained with Harry’s hematoxylin (Merck). For each case, negative controls were performed by omitting the primary antibody. Intensity and localization of immunoreactivities against the primary antibody used were examined on all coverslips using a photomicroscope (Olympus BX41, Olympus Optical Co., Ltd., Tokyo, Japan). For image analysis, color images of representative areas (400×) were digitally captured. For p53, p65-NF-kB and Nrf2 analyses, the percentage of cells with labeled nuclei were calculated.
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2

Detecting Nitrotyrosine Residues in Tissues

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Nitrotyrosine (NT) is a residue formed by the action of peroxynitrite (derived from the reaction of nitric oxide and superoxide anion) on proteins. Paraffin-embedded sections were heated (30 min, 65°C), deparaffinized, and rehydrated. Sections were treated at room temperature with 2% bovine serum albumin and incubated overnight at 4°C with primary mouse anti-human antibodies against NT-labeled residues (diluted 1 : 300, Santa Cruz Biotechnology, clone sc-32757, USA), previously validated for human samples [13 (link)]. The secondary antibody, horseradish peroxidase, and 3,3′-diaminobenzidine (DAB) were provided by the commercial kit (Dako LSAB, Germany). In the last step, sections were weakly counterstained with Harry's hematoxylin (Merck). For each case, negative controls were performed on serial sections by omitting the primary antibody incubation step. The intensity and localization of the immunoreactivity were examined with a photomicroscope (Leica DM 2500 and Leica DFC280, Leica, Germany).
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3

Histological Staining of ACL Tissue

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ACL tissue samples (length: ~2 mm) were fixed overnight in 4% PFA solution, dehydrated and finally embedded in paraffin. After slicing, the 7 µm sections were rehydrated in a descending alcohol series and prepared for hematoxylin eosin (HE) and alcian blue (AB) staining.
For HE staining paraffin sections and glass cover slips were incubated for 6 min in Harry’s hematoxylin (Sigma-Aldrich, Munich, Germany), before rinsed in tap water and counterstained for 4 min in eosin (Carl Roth GmbH, Karlsruhe, Germany).
For AB performance, the tissue sections were rehydrated in a descending alcohol series and subsequently incubated for 3 min in 1% acetic acid before incubated for 30 min in 1% AB staining solution (Carl Roth GmbH, Karlsruhe, Germany). After rinsing in 3% acetic acid and a 2 min washing step in A. dest., ligamentocyte cell nuclei were counterstained for 5 min in nuclear fast red aluminium sulphate solution (Carl Roth GmbH).
HE and AB stained sections were covered with Entellan (Merck-Millipore, Darmstadt, Germany). Photos were taken using a DM1000 LED light microscope (Leica, Wetzlar, Germany).
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4

Histological Analysis of Native and Explanted Ligament Samples

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Before and after several weeks of explant culture, the native ligament samples (ITB, length approx. 2 mm) and ITB explant samples (length: approx. 2 mm) were fixed in a 4% paraformaldehyde solution (PFA, Santa Cruz Biotechnology Inc., Dallas, USA), dehydrated, and finally embedded in paraffin. After slicing, the 7-µm sections were rehydrated in a descending ethanol series and prepared for HE as well as Alcian blue (AB) staining.
For HE staining, the sections were incubated for 6 min in Harry`s hematoxylin (Sigma-Aldrich, Munich, Germany), before being rinsed in tap water and counterstained for 4 min in eosin (Carl Roth GmbH, Karlsruhe, Germany). The sections were covered with Entellan (Merck-Millipore, Darmstadt, Germany).
For the AB performance, the sections were rehydrated in a descending ethanol series and subsequently incubated for 3 min in 1% acetic acid before being incubated for 30 min in a 1% AB staining solution (Carl Roth GmbH). After rinsing in 3% acetic acid and a 2 min washing step in distilled water (A. dest.), fibroblast cell nuclei were counterstained for 5 min in a nuclear fast red aluminium sulphate solution (Carl Roth GmbH).
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5

Histological Analysis of Scaffold Cultures

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For fixation, scaffold cultures were immersed in 4% paraformaldehyde for 24 h (PFA, Santa Cruz Biotechnology Inc.) and stored at 4 °C. Before embedding in paraffin (Merck KGaA), scaffolds were dehydrated in ascending alcohol series (70%, 80%, 96% and 99.6%) followed by xylene. Moreover, 8–10 µm (unilayer or bilayer scaffolds) thick paraffin sections were deparaffinized using 2 × 5 min incubation in xylene and a descending alcohol series. For hematoxylin–eosin (HE) stain, deparaffinized sections were incubated in Harry’s hematoxylin (Sigma-Aldrich) for 6 min, washed in running tap water and immersed in eosin for 4 min (Carl Roth GmbH and Ko.KG). Alcian blue (AB) staining was performed to display content of sulfated glycosaminoglycans (sGAGs). For this, the sections were treated with 1% acetic acid for 3 min, incubated in 1% AB for 30 min (Carl Roth GmbH and Ko.KG), rinsed in 3% acetic acid and washed for 2 min in distilled water (A. dist.). Nuclear fast red aluminum sulfate solution was used for the counterstaining of cell nuclei (Carl Roth GmbH and Ko.KG) for 5 min.
Each staining was covered with Entellan (Merck KGaA).
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6

Quantifying Megakaryocyte Colony Formation

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To evaluate colony-forming unit megakaryoctye (CFU Mk), we used a collagen-based assay (Stem Cell) bone marrow (BM) cells were resuspended at a concentration of 2.2 × 106/mL and in Iscove modified Dulbecco medium (without fetal bovine serum). A total of 0.1 mL of the cell suspension was added to 2 mL of MagaCultTM-C serum free media supplemented with human recombinant TPO, human recombinant IL-6 and mouse recombinant IL-3 (Peprotech). All the mixture was then added to 1.2 mL of collagen solution dispensed into a chamber slide (750 μL for each well) and transferred into a 37°C incubator for 8 days. To evaluate CFU-Mk, cultures were dehydrated, fixed in acetone, and stained in an acetylthiocholiniodide solution added with sodium citrate, copper sulfate, and potassium ferricyanide solution, according to manufacturer instructions. Slides were then fixed in ethanol and counterstained with the Harry's hematoxylin (Sigma Aldrich). Megakaryocyte colonies (brown) were imaged and counted under an inverted microscope (Evos, Life Technologies).
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7

Peripheral Node Addressin Staining

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Peripheral node addressin staining for the detection of highendothelial venules was performed as previously described [30] . In brief, sections were deparaffinized, rehydrated, subjected to heat-induced antigen retrieval, blocked, and incubated with the peripheral node addressin primary antibody. Next, the sections were incubated with HRP-labeled goat anti-rat light chain secondary antibody (#AP202P, Millipore, Temecula, CA, diluted 1:250, incubated 30 min) and diaminobenzidine (Dako EnVision+ System-Horseradish Peroxidase, Dako) before being counterstained with Harry's hematoxylin (Sigma-Aldrich, St. Louis, MO). Human lymph node specimens were used as positive control, and specimens with the primary antibody omitted served as negative control.
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