The largest database of trusted experimental protocols

Gel documentation system

Manufactured by Fujifilm
Sourced in Japan, United States

The Gel Documentation System is a laboratory instrument designed for the visualization and analysis of nucleic acid and protein samples separated by gel electrophoresis. It captures and digitizes images of stained gels, allowing for quantitative analysis of bands or spots.

Automatically generated - may contain errors

3 protocols using gel documentation system

1

RT-PCR Analysis of Parkin Gene Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was extracted using TRIzol® reagent (Invitrogen, Carlsbad, CA, USA) according to the manufacturer’s instructions. RNA (2 µg) was reverse transcribed using oligo (dT)16 primers to obtain cDNA. The cDNA was amplified using a high-capacity cDNA synthesis kit (Bioneer, Daejeon, Republic of Korea) with a thermal cycler (Bio-Rad, Hercules, CA, USA). The amplified products were separated on a 2% agarose gel, stained with ethidium bromide (Sigma-Aldrich, St. Louis, MO, USA), and visualized with a gel documentation system (Fujifilm, Tokyo, Japan). The primer sequences were as follows: human parkin sense 5′-TCCTTCCTGCTGTCAGTGTG-3′, and antisense 5′-GCAGAGACCGTGGAGAAAAG-3′; human GAPDH sense 5′-GAAGGTGAAGGTCGGAGTC-3′, and antisense 5′-GAAGATGGTGATGGGATTTC-3′. Equal loading was verified based on the GAPDH level.
+ Open protocol
+ Expand
2

RT-PCR Analysis of ECM Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
TRIzol (Invitrogen) was used to obtain total RNA extracts according to the manufacturer’s protocol. To synthesize cDNA, total RNA (2 μg) was reverse-transcribed using an oligo-dT18 primer. The synthesized cDNA was amplified using a high-capacity cDNA synthesis kit (Bioneer, Daejeon, Korea) with a thermal cycler (Bio-Rad, Hercules, CA, USA). PCR-amplified products were separated by 2% agarose gel electrophoresis and staining with ethidium bromide (Sigma, St. Louis) and imaged using a gel documentation system (Fujifilm). The following PCR primer sequences were used: human MMP3 sense 5′-AACCTGTCCCTCCAGAACCT-3′ and antisense 5′-GGAAGAGATGGCCAAAATGA-3′; human MMP9 sense 5′-CTCGAACTTTGACAGCGACA-3′ and antisense 5′-GCCATTCACGTCGTCCTTAT-3′; human Col1A1 sense 5′-CACAGAGGTTTCAGTGGTTTGG-3′ and antisense 5′-GCACCAGTAGCACCATCATTTC-3′; human GADD153/CHOP sense 5′-AGGGAGAACCAGGAAACGGAAACA-3′ and antisense 5′-TCCTGCTTGAGCCGTTCATTCTCT-3′; human and human GAPDH sense 5′-GAAGGTGAAGGTCGGAGTC-3′ and antisense 5′-GAAGATGGTGATGGGATTTC-3′. GAPDH was used as a reference gene for normalization.
+ Open protocol
+ Expand
3

Melanogenesis Gene Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
TRIzol (Invitrogen) was used to obtain the total RNA extract according to the manufacturer’s protocol. To synthesize cDNA, total RNA (2 µg) was reverse-transcribed using oligo dT18 primer. The synthesized cDNA was amplified using a high-capacity cDNA synthesis kit (Bioneer, Daejeon, Korea) with a thermal cycler (Bio-Rad, Hercules, CA, USA). PCR-amplified products were separated using 2% agarose gel, including ethidium bromide (Sigma, St. Louis, MO, USA), and imaged in a gel documentation system (Fujifilm, Tokyo, Japan) [30 (link)]. The following primer sequences were used: mouse tyrosinase 5′-ATAACAGCTCCCACCAGTGC-3′ (sense) and 5′-CCCAGAAGCCAATGCACCTA-3′ (antisense) (NM_011661.5); mouse MITF, 5′-CTGTACTCTGAGCAGCAGGTG-3′ (sense) and 5′-CCCGTCTCTGGAAACTTGATCG-3′ (antisense) (NM_001178049.1); mouse TRP-1 5′-AGACGCTGCACTGCTGGTC AAGCCTGTAGCCCACGTCGTA-3′ (sense) and 5′-GCTGCAGGAGCCTTCTTTCT-3′ (antisense) (NM_001282015.1). The expression of glyceraldehyde 3-phosphate dehydrogenase was used as an endogenous control for qRT-PCR experiments [20 (link)].
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!