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9 protocols using ab269513

1

Immunohistochemical Analysis of Aortic Markers

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As previously described [13 (link)], the expression of NF-қB p65 (6956T, CST, Boston, MA, USA), α-SMA (ab5694, Abcam, Cambridge, MA, USA), CD68 (ab201340, Abcam, Cambridge, MA, USA), TFRC (ab269513, Abcam, Cambridge, MA, USA), and FTL (ab269513, Abcam, Cambridge, MA, USA) in the abdominal aorta tissues were assessed via immunostaining. Briefly, sections were blocked with a 3% hydrogen peroxide (H2O2) to block the endogenous peroxidase. Then, the sections were incubated overnight with primary anti-NF-қB p65, anti-α-SMA, anti-TFRC, and anti-FTL antibodies at 4 °C. Next, washing was performed and the secondary antibody was incubated for 1 h at room temperature. After washing, sections were counterstained with hematoxylin and visualized with a diaminobenzidine (DAB) kit (Vector Laboratories, Burlingame, CA, USA). For immunofluorescence staining, the sections were incubated with primary anti-CD68 overnight at 4 °C. Afterwards, the sections were incubated with the appropriate fluorescently labeled secondary antibodies for 1 h at room temperature. After washing, DAPI (Roche) was used to stain the nuclei for 8 min. Images were taken with a DS-Fil digital camera mounted on a Nikon Eclipse 80i fluorescence microscope (Nikon).
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2

Immunofluorescence Staining of Cathepsin and Iron Markers

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The injured CAs underwent a series of processes, including excision, fixation, and embedding in paraffin. Then, the CAs were cut into 4 μm thick sections and analyzed through IF staining. Homoplastically, the treated HUVECs were fixed in 4% paraformaldehyde. Next, as previously described [20 (link)], the sections and HUVECs were incubated with primary antibodies against cathepsin B (1 : 100, ab214428, Abcam), cathepsin D (1 : 200, #2284 s, Cell Signaling Technology), ferritin (1 : 50, ab75973, Abcam), and TfR (1 : 50, ab269513, Abcam) at 4°C overnight. After washing three times on the following day, the samples were then incubated with Alexa Fluor 488-conjugated donkey anti-rabbit IgG (H+L) (1 : 300, A32790, Invitrogen, Carlsbad, CA, USA), Alexa Fluor 555-conjugated donkey anti-rabbit IgG (H+L) (1 : 300, A32794, Invitrogen), Alexa Fluor 488-conjugated goat anti-mouse IgG (1 : 300, A-11001, Invitrogen), and Alexa Fluor 555-conjugated goat anti-mouse (1 : 300, A-21424, Invitrogen) secondary antibodies at 37°C for 1 h. Next, 4,6-diamino-2-phenylindole (SouthernBiotech, Birmingham, AL, USA) was added to each section for coverslipping. Finally, the sections were observed under a fluorescence microscope (OLYMPUS BX50/BX-FLA/DP70; Olympus Co., Tokyo, Japan), and ImageJ software was used to quantify the fluorescence intensity.
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3

Immunohistochemical Analysis of Oxidative Stress Markers

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The slices on slides were subjected to dewaxing and rehydration. Subsequently, permeabilization was performed using 1% Triton X-100 (#T8200; Solarbio) and blocking was performed with 10% horse serum. Next, the sections were incubated overnight at 4°C with the following primary antibodies: Ptgs2 (1:200, ab283574; Abcam, Cambridge, UK), Gpx4 (1:200, ab125066; Abcam), hepcidin (1:200, AF7003; Affinity, Liyang, China), IGF-1R (1:200, AF6125; Affinity), P-IGF-1R (1:200, AF3123; Affinity), P-AKT (1:200, AF0016; Affinity), ferritin (1:100, ab287968; Abcam) and TfR1 (1:2000, ab269513; Abcam). Then, the HRP-conjugated secondary antibody (PV-6000; ZSGB-BIO, Beijing, China) was used for incubation at 37°C for 20 min. Reaction products were visualized by using 3,3′-diaminobenzidine (DAB). The images were captured with the PA53 biological microscope.
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4

Ischemic Penumbra Protein Analysis

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The ischemic penumbra of rat brain tissues (n = 6) was collected for Western blot analysis as previously described (Liu et al., 2020 (link)). The following primary antibodies were used: anti‐beta‐Actin (Abcam, ab8226, 1:1000), anti‐GPX4 (Abcam, ab252833, 1:1000), anti‐FTH1 (Abcam, ab183781, 1:1000), anti‐TF (Abcam, ab82411, 1:1000), anti‐TF receptor (Abcam, ab269513, 1:1000), anti‐HO1 (Abcam, ab68477, 1:1000), anti‐ACSL‐4 (Abcam, ab155282, 1:1000), and anti‐xCT (Invitrogen, PA1‐16893, 1:1000).
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5

Mitochondrial Metabolic Modulation

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Anti-peroxisome proliferator-activated receptor γ coactivator 1 alpha (PCG-1α) antibody (ab191838), anti-nuclear respiratory factor 1 (NRF1) antibody (ab175932), anti-mitochondrial transcription factor A (TFAM) antibody (ab176558), anti-ferritin heavy chain 1 (FTH1) antibody (ab65080), anti-transferrin receptor (ab269513), anti-glutathione peroxidase 4 antibody (ab125066) and anti-Grsf1 (ab205531) were purchased from Abcam. Rifampicin (R817237), isoniazid (I811711), and silybin (S817883) were purchased from Macklin Inc.
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6

Western Blot Analysis of Apoptosis and Inflammation Markers

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Western blotting was conducted as previously described [13 (link),14 (link)]. Briefly, total protein was isolated from frozen abdominal aorta tissues. Then, the cells were lysed using RIPA buffer and further quantified using a BCA protein assay Kit (KGP2100, Keygen, China). Next, the proteins were subjected to SDS-PAGE and electrotransferred onto PVDF membranes (Bio-Rad, Hercules, CA, USA). Then, the membranes were incubated with primary antibodies overnight at 4 °C, followed by the corresponding secondary antibodies (Li-COR Biosciences, Lincoln, NE, USA) for 1 h at room temperature. The primary antibodies used were as follows: β-actin (4970S, Cell Signaling Technology, CST, Boston, MA, USA), Caspase-3 (9662S, CST, USA), Caspase-8 (4790T, CST, Boston, USA), Caspase-9 (9508S, CST, Boston, MA, USA), NF-қB p65 (8242S, CST, Boston, MA, USA), Phospho-NF-қB p65 (Ser536) (3033T, CST, Boston, MA, USA), TLR2 (13744S, CST, USA), TLR4 (A00017S441, Boster, Wuhan, China), p38 MAPK (9212S, CST, USA), Phospho-p38 MAPK (Thr180/Tyr182) (4613S, CST, Boston, MA, USA), BCL-2 (ab32124, Abcam, Cambridge, MA, USA), Bax (ab32503, Abcam, Cambridge, MA, USA), and TFRC (ab269513, Abcam, Cambridge, MA, USA). The target protein bands were visualized using the Odyssey Infrared Imaging System (Li-COR Biosciences, USA).
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7

Antibody Validation for Oxidative Stress

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Antibodies including Ferritin Heavy Chain (FTH1) antibody (ab183781), Transferrin Receptor 1 (TFR1) antibody (ab269513), Glutathione Peroxidase 4 (GPX4) antibody (ab125066), and Heme Oxygenase 1 (Hmox1) antibody (ab52947) were purchased from Abcam (Cambridge, UK). Antibodies including GAPDH (#5174), mouse IgG (H+L) (#14709), and rabbit IgG (H+L) (#14708) were obtained from CST (NY, USA). MitoTEMPO (#SML0737) and doxorubicin (#D807083) were purchased from Sigma (Darmstadt, Germany).
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8

Western Blot Analysis of Hepatocyte Proteins

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Protein lysates, obtained from hepatocytes and liver specimens, were electrophoresed on 4–12% precast bis–tris gels (Genscript, Nanjing, China) and subsequently transferred onto polyvinylidene fluoride (PVDF) membranes. The membranes were then blocked using protein-free rapid blocking buffer (EpiZyme, Shanghai, China) and incubated with primary antibodies overnight at 4 °C. Antibodies used were as follows: Med1 (ab243893, Abcam), Nrf2 (D1Z9C) (12721S, CST), HO-1 (R24541, Zen BioScience), ACSL4 (DF12141, Affinity Biosciences), TfR1 (ab269513, Abcam), SLC7A11 (ab175186, Abcam), GPX4 (ab125066, Abcam), NQO1(DF6437, Affinity Biosciences) and β-Tubulin (66,240–1-Ig, Proteintech).
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9

Immunofluorescence Analysis of Cathepsin, Ferritin and TfR

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The injured CA was excised, xed, embedded in para n and cut into 4-µm sections and examined by IF staining. Homoplastically, the disposed HUVECs were xed by 4% paraformaldehyde. As previously described [20] , The sections and HUVECs were incubated with primary antibodies to Cathepsin B (1:100, ab214428, abcam), Cathepsin D (1:200, #2284s, Cell Signaling Technology), Ferritin (1:50, ab75973, abcam) and TfR (1:50, ab269513, abcam) at 4°C overnight. Then, it was incubated with the Donkey anti-
Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 (1:300, A32790, Invitrogen) and Alexa Fluor 555 (1:300, A32794, Invitrogen) and Goat anti-Mouse IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 (1:300, A-11001, Invitrogen) and Alexa Fluor 555 (1:300, A-21424, Invitrogen) at 37°C for 1 hour after washed 3 times on the following day. Next, the sections were added into 4,6-diamino-2-phenylindole (SouthernBiotech, Birmingham, AL, USA) for coverslipping. In the end, the sections were observed under a uorescence microscopeOLYMPUS BX50/BX-FLA/DP70; Olympus Co., Japan, and ImageJ software was used for quantizing the uorescence intensity.
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