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Coomassie brilliant blue r 250 cbb

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Coomassie Brilliant Blue R-250 (CBB) is a protein-binding dye commonly used in biochemical assays. It is a blue-colored dye that binds to proteins, allowing for the quantification and visualization of protein samples.

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6 protocols using coomassie brilliant blue r 250 cbb

1

Protein Analysis by SDS-PAGE

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Samples of the cell lysates taken before and after IPTG induction were suspended and boiled in 5× Laemmli sample buffer (Bio-Rad, USA), and examined by polyacrylamide gel electrophoresis (PAGE; Bio-Rad, USA) in the presence of SDS on 12.5% (w/v) gels (Laemmli, 1970 (link)). Following this, Coomassie brilliant blue R-250 (CBB; Bio-Rad, USA) was used to stain the gel before viewing.
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2

Gelatin Zymography for Proteinase Detection

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Zymography was performed using Novex 10% Zymogram Gelatin Gel (Life Technologies/Invitrogen/Thermo Fisher Scientific, Waltham, MA, USA) or Precast Casein Zymogram Gel (Cosmo Bio Co., LTD., Tokyo, Japan). Samples were dissolved in NuPAGE LDS sample buffer (Invitrogen), and electrophoresis was performed at 30 mA for approximately 1 h with Novex Tris Glycine SDS running buffer (Life Technologies/Invitrogen/Thermo Fisher Scientific). The gel was shaken gently in 2.5% Triton X-100 solution for 1 h at room temperature with one buffer change, and incubated overnight with or without 10 mM EDTA in 50 mM Tris–HCl (pH 7.4) containing 10 mM CaCl2. Proteinase activities were visualized as unstained bands after the gel was stained with Coomassie Brilliant Blue R-250 (CBB) (Bio-Rad Laboratories, Hercules, CA, USA). The apparent molecular weights of the protein bands were estimated by comparison with DynaMarker Protein MultiColor III (BioDynamics Laboratory Inc., Tokyo, Japan).
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3

SDS-PAGE Protein Separation and Visualization

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After IPTG induction, the bacteria cultures were harvested and the pellets were suspended in 2× Laemmli sample buffer (Bio-Rad, USA). The samples were boiled for 5 min before loaded into 12.5% (w/v) polyacrylamide gel electrophoresis system (PAGE, Bio-Rad, USA) in the presence of sodium dodecyl sulfate (SDS) according to the methods established by Laemmli (1970) (link). To identify the protein bands, the gels were stained with Coomassie brilliant blue R-250 (CBB; Bio-Rad, USA).
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4

SDS-PAGE Protein Visualization

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The protein samples were incubated for 3 min at 95°C before subjected to 12% Tris‐Glycine polyacrylamide gel electrophoresis (Thermo Scientific, USA) using 1× Tris‐Glycine‐SDS buffer (Thermo Scientific, USA) at 125 V for 15 min followed by 150 V for 60 min. To visualize the protein bands, the gels were stained with Coomassie brilliant blue R250 (CBB; Bio‐Rad, USA) for 5 min, followed by destaining step with destaining solution (10% v/v glacial acetic acid; 40% v/v methanol; 50% v/v distilled water) for three times, each 10 min long.
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5

GST-N-DSP Fusion Protein Expression

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The pGEX-4T-1-GST-N-DSP or pGEX-4T-1-GST vector was transformed into the BL21-CodonPlus bacterial strain (Agilent Technologies), cultured, and GST-N-DSP fusion protein or GST protein alone was generated as previously reported [11 (link)]. Aliquots of each GST protein were mixed with SDS sample buffer, applied to 4–12 % SDS-PAGE, and stained with Coomassie Brilliant Blue R-250 (CBB) (Bio-Rad). Western blot analysis with anti-DSP or anti-GST (GE Healthcare Life Sciences) antibody was also performed as described above and the immunoreactivity of the protein was confirmed. The synthetic mouse N-DSP peptide (IPVPQLVPLERDIVENSVAVPLLTHPGTAA) was obtained from Peptide 2.0, Inc.
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6

GST-N-DSP Fusion Protein Expression

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The pGEX-4T-1-GST-N-DSP or pGEX-4T-1-GST vector was transformed into the BL21-CodonPlus bacterial strain (Agilent Technologies), cultured, and GST-N-DSP fusion protein or GST protein alone was generated as previously reported [11] (link). Aliquots of each GST protein were mixed with SDS sample buffer, applied to 4–12% SDS-PAGE, and stained with Coomassie Brilliant Blue R-250 (CBB) (Bio-Rad). Western blot analysis with anti-DSP or anti-GST (GE Healthcare Life Sciences) antibody was also performed as described above and the immunoreactivity of the protein was confirmed. The synthetic mouse N-DSP peptide (IPVPQLVPLERDIVENSVAVPLLTHPGTAA) was obtained from Peptide 2.0, Inc.
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