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Mirna assay kit

Manufactured by Thermo Fisher Scientific
Sourced in United States

The MiRNA assay kit is a lab equipment product designed for the detection and analysis of microRNA (miRNA) molecules. It provides a platform for researchers to measure and quantify miRNA expression levels in various biological samples.

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6 protocols using mirna assay kit

1

miRNA Expression Profiling by qRT-PCR

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Total RNA extracted using TRIzol (Life Technologies, Carlsbad, CA) was treated with DNase I (Promega, Fitchburg, Wisconsin) and retrotranscribed using the High Capacity cDNA Reverse Transcription Kit (Life Technologies, Carlsbad, CA), and the corresponding loop-primer of the miRNA Assay Kit (Life Technologies, Carlsbad, CA), according to the manufacturer's instructions. The reverse transcription reaction was followed by quantitative real-time PCR (qRT-PCR) using specific primers included in miRNA Assay Kit (Life Technologies, Carlsbad, CA) with TaqMan PCR Master Mix (Life Technologies, Carlsbad, CA).
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2

Quantitative Real-Time PCR for miRNA and mRNA

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Total RNA from cultured cells or tissues was isolated using the Qiagen miRNeasy kit. RNA was reverse transcribed with Moloney-murine leukemia virus (Promega). Real-time PCR for miRNA and mRNA were performed as described before (17 (link)). Briefly, mRNA SYBR green quantitative real-time PCR (Applied Biosystems) was performed to detect expression of mRNA levels in a HT7900 Fast Real-Time PCR System. 18S was used as the internal control. miRNA quantitative real-time PCR was performed according to the instruction of miRNA assay kit (Applied Biosystems) with snoRNA202 as the internal control.
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3

Quantifying miR-95-3p and HDGF Gene Expression

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Mature miR-95-3p expression was detected using a miRNA-assay kit (Applied Biosystems, Foster City, CA, USA) according to the manufacturer's instructions. The U6 gene was used as a normalization control. All experiments were performed in triplicate and repeated once. To verify the integrity of HDGF expression, the GAPDH gene was used as an internal control. qRT-PCR was run using the following conditions: 30 cycles consisting of denaturation at 94 °C for 30 s, annealing at 56 °C (58 °C for GAPDH) for 30 s, and extension at 72 °C for 30 s. The primer sequences were as follows:miR-195 forward, 5′-ACACTCCAGCTGGGTTCAACGGGTATTTAT-3′ andreverse,5′-TGGTGTCGTGGA GGAGTCG-3'; U6 forward, 5′-CTC GCT TCG GCA GCA CA-3′ and reverse,5′-AACGCTTCA CGA ATT TGC GT-3'; HDGF forward, 5′-GAG GGT GAC GGT GAT AAG AA-3′ and reverse, 5′-GAAACATTGGTG GCTACA GG-3'; and GAPDH forward, 5′-TGCACC ACC AAC TGC TTA GC-3′ and reverse, 5′-GGC ATG CACTGTGGTCATGAG-3'. All samples were amplified in triplicate.
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4

Quantitative Analysis of Cardiac Genes

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Total RNA was extracted by the TRIzol reagent (Invitrogen, Carlsbad, CA, USA) according to the manufacturer's instructions. Reverse transcription was performed, and cDNA was prepared for amplification. The expression levels of EP1–4, β‐MHC, and ANP were quantified by a miRNA Assay Kit (Applied Biosystems, Foster City, CA). The mRNA levels were calculated by the comparative cycle threshold (∆∆Ct) method. The relative expression was normalized with GAPDH.
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5

Molecular Mechanisms of K-Ras Signaling Pathway

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In Situ Cell Death Detection Kit, 5-azacytidinecytidine, anti-caspase 3 antibody, anti-actin antibody, anti-p70S6K (Thr389), fetal bovine serum (FBS) and cell culture medium were obtained from Sigma (St. Louis, MO). Dual-Luciferase Assay Kit and Invasion Assay Kit were purchased from Promega (Madison, WI) and BD Biosciences (San Jose, CA), respectively. TRIzol, cDNA reverse transcription kit, miRNA luciferase reporter vector, primer sets for miR-199b and U6, Lipofectamine 2000, SYBR Green PCR kit, miR-199b mimics, control oligonucleotides, and miRNA assay kit were purchased from Life Technologies (Carlsbad, CA). Human miRNA Array v2.0 and Human genome U133 Plus 2 array were obtained from Arraystar (Rockville, MD) and Affymetrix (Santa Clara, CA), respectively. shRNA of K-Ras, Renilla Luciferase, and K-Ras (G12D) expression constructs were kindly provided by Dr. Cheng (Moffitt Cancer Center). Antibodies against K-Ras, KSR2, PIK3R1, Rheb1, Akt1, phospho-Akt (Ser473), phospho-ERK (Thr202/Tyr204), phospho-mTOR (Ser2448), and Ki-67 were purchased from Abcam (Cambridge, MA). K-Ras (G12D) antibody was obtained from Cell Signaling Technology, Inc.
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6

Comprehensive miRNA Profiling and Regulation

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Cell culture medium and reagents, oligofectamine, lipofectamine 2000, random hexamers, turbo DNA-free kit, miRNA assay kit, miRNA reverse transcription kit, synthetic mature and pre-mature miRNAs, anti-miR-200 oligonucleotides, MCPiP1 siRNA, PCR TaqMan probes, Go TaqH hot start DNA polymerase and Moloney Murine Leukemia Virus Reverse Transcriptase (MMLV) were provided by Life Technologies. Gemcitabine (GEM), 5-Azacytidine (5-AZA) and anti-β-actine antibody were from Sigma-Aldrich. Enhanced chemiluminescent substrate was from Millipore. Protease inhibitor cocktail was provided by Roche Life Science. Kapa Fast Sybr qPCR Mix was from Clinisciences. RNAzol-RT, RanQ69L-GTP and anti-Dicer1 antibody were from Euromedex. GoTaq G2 DNA polymerase, Go Script reverse transcriptase and RNAsin RNase inhibitor were from Promega. PCR, qPCR and RT specific primers were obtained from Eurogentec. PolyA polymerase tailing kit, anti-MCPiP1, anti-Histone H1 and anti-calnexin antibodies were from Tebu-Bio. Anti-XPO5 antibody was from Cell Signalling. Protein A/G plus agarose was provided by Santa Cruz. pDestmycDICER1 expression vector was a gift from Thomas Tuschi (Addgene plasmid # 19873).
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