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5 protocols using sc 366

1

Protein Expression Analysis in Lipid-Treated Cells

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After treatment with stearate, oleate or linoleate, cells were collected and total proteins were lysed using RIPA lysis buffer (Beyotime, Nanjing, China). The homogenates were combined with equal volumes of SDS sample buffer, and the proteins were separated by electrophoresis on a 5~12% polyacrylamide gel and transferred onto nitrocellulose membranes. The membranes were blocked with 5% skim milk in Tris-buffered saline with Tween-20, followed by overnight probing with the following primary antibodies: (1) CD36 (N-15) antibody (sc-5522, 1:500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), (2) ACACA (T-18) antibody (sc-26817, 1:500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), (3) DGAT1 antibody (ab59034, 1:500, Abcam, Cambridge, MA, USA), (4) SREBP1 (C-20) (sc-366, 1:500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), (5) PPARγ (T-18) antibody (ab19481, 1:500, Abcam, Cambridge, MA, USA), (6) β-actin (C4) antibody (sc-47778, 1:1000, Santa Cruz Biotechnology, Santa Cruz, CA, USA). β-actin was intended to serve as a loading (internal) control. After washing, membranes were incubated with secondary antibody (ABR, Golden, CO, USA) and conjugated to HRP. The chemiluminescent signal was detected using ECL reagents (Beyotime, Nanjing, China) and bands were quantified by image processing software (Image Pro Plus 6.0, Media Cybernetics, Rockville, MD, USA).
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2

Western Blot Analysis of Hepatic Proteins

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Total protein were extracted from 100 mg frozen liver sample as previously described [26 (link)]. Protein concentrations were determined using Pierce BCA Protein Assay kit (Rockford, IL, USA) according to the manufacturer’s instructions. 40 μg of protein was used for electrophoresis on a 10% or 7.5% SDS-PAGE gel. Western blot analysis for HMGCR (bs6625, Bioworld Technology, USA, diluted 1:1000), SREBP1 (sc-366, santa cruz, USA, diluted 1:200), SREBP2 (sc-5603, santa cruz, USA, diluted 1:200), CYP7A1 (ab79847, Abcam, UK, diluted 1:200), CYP27A1 (bs2192, Bioworld Technology, USA, diluted 1:200), BHMT (15965-1-AP, Proteintech, USA, diluted 1:200), AHCYL1 (10658-3-AP, Proteintech, USA, diluted 1:1000), DNMT1 (24206-1-AP, Proteintech, USA, diluted 1:1000), DNMT3a (bs6587, Bioworld Technology USA, diluted 1:500), H3K27me3 (17–622, Millipore, USA, diluted 1:500) was carried out according to the recommended protocols provided by the manufacturers. The β-actin (AP0060, Bioworld, USA, diluted 1:10,000) was used as loading control in the Western blot analysis. Images were captured by VersaDoc 4000MP system (Bio-Rad, USA) and the band density was analyzed with Quantity One software (Bio-Rad, USA).
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3

Protein Expression Analysis by Western Blot

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Proteins concentration was measured using Lowry method (Lowry et al. 1951 ) and 60 µg of proteins were subjected to electrophoresis on 7.5% SDS-PAGE. After transfer to PVDF membrane (Immobilon-FL membrane, Millipore), using a Transblot system (Bio-Rad Laboratories), the unbound sites were blocked (1 h with 2% non-fat dry milk) and the membranes were probed with specific primary rabbit polyclonal antibodies for anti-phospho-p38 Tyr 182 (1:750) (sc-7975-R, Santa Cruz Biotechnology), anti-p38 MAPK (1:500) (sc-535, Santa Cruz Biotechnology), anti-GR (1:500) (sc-8992, Santa Cruz Biotechnology), anti-11BHSD1 (1:1000) (ab393364, Abcam), anti-H6PDH (1:1000) (sc-67394, Santa Cruz Biotechnology), anti-SREBP1c (1:500) (sc-366, Santa Cruz Biotechnology) and mouse monoclonal anti-PPARG (1:1000) (sc-7273, Santa Cruz Biotechnology). Monoclonal mouse anti-B-actin antibody (1:10,000) (AC-15, Sigma-Aldrich) was used as a loading control. Blots were developed with secondary ECL anti-rabbit IgG HRP-linked whole antibody (1:10,000) (Amersham Pharmacia Biotech) or with anti-mouse IgG HRP-linked whole antibody (1:20,000) (ab97046, Abcam). Signal was developed using enhanced chemiluminescence Downloaded from Bioscientifica.com at 09/07/2024 04:13:17AM via free access (ECL) and densitometry of protein bands on X-ray films (Kodak, Rochester, USA) was performed by Image J software (NIH).
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4

Quantifying miRNAs and Protein Expression

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The total RNA from the whole blood samples (5 ml) collected in tubes containing EDTA was rigorously extracted with RNAVzol LS (Vigorous Biotechnology, Beijing) according to the manufacturer's instructions. Stem-loop reverse transcription-polymerase chain reaction (RT-PCR) was conducted with the samples to detect and quantify mature miRNAs by using stem-loop antisense primer mix and M-MuLV transcriptase (NEB).
The SYBR Green I method was used for real-time PCR with the Bio-Rad iQ5 system (Bio-Rad) according to the manufacturer's instructions (TaKaRa) The relative expression level of a miRNA was normalized to an internal invariant control, U6 small nucleolar RNA. Each reaction was performed in triplicate, and analysis was performed using the 2 -△△CT method.
Western blot analysis A total of 15 µg protein was separated by 10% SDS-PAGE and then transferred to PVDF membrane (Millipore), followed by 8% nonfat dry milk blocking. After washing with PBST three times (5 min/wash), the membranes were incubated with primary antibodies at 4°C overnight. The blot was incubated with HRP-conjugated anti-IgG, followed by detection with ECL (Millipore). Antibodies against LXRα (ab28478) were purchased from Abcam. FAS (#3180) and β-actin (#4970) were obtained from Cell Signaling Technology. An antibody against SREBP1 was purchased from Santa Cruz Biotechnology (sc-366).
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5

Proteomic Analysis of Adipose Tissue

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Frozen fat tissue (300 mg) was solubilized in 500 µl 2.5X Laemmli buffer containing 150 mM dithiotreitol. Lysates were subjected to SDS-PAGE, blotted onto nitrocellulose membranes, and probed with antibodies directed against MFN2 (1/1000; Abcam, ab50838, Cambridge, UK), SREBP-1 (1/500; SC-366, Santa Cruz Biotechnology, TX, USA), PPARSC-7196 adiponectin (1/1000; MAI-054, Affinity BioReagents, Golden United States), CITED1 (1/1000; Novus H0000443S-M03, Bio-Techne, Lille, France), FGF21 (1/1000; Abcam ab171941), PGC-1 (1/500; SC-5816), and tubulin (T5168, Sigma-Aldrich, St. Quentin Fallavier, France). Tubulin was used as a loading control.
18 F-FDG-PET scan 18 F-fluoro-2-deoxy-D-glucose (FDG) positron emission tomography (PET) with computed tomography (CT) was performed according to the EANM guidelines [27] . Patients fasted for at least 4.5 h. A Gemini Dual PET/CT camera (Philips) with time of flight (TOF) technology was used for imaging. Low-dose CT (120 kVp, 30-50 mAs) was acquired first, followed by PET acquisition 60-70 min after a weight-adjusted dose of 2.5 MBq/kilogram 18 F-FDG injection, covering a complete whole-body field of view, from the skull to the feet.
Standardized uptakes values (SUV) were calculated for the regions of interest. FDG uptake in the liver was taken as a reference.
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