The largest database of trusted experimental protocols

Abi quantstudio 6 flex rt pcr system

Manufactured by Thermo Fisher Scientific
Sourced in United States

The ABI QuantStudio 6 Flex RT-PCR System is a real-time PCR instrument designed for gene expression analysis, genotyping, copy number variation, and other molecular applications. The system features a flexible configuration with six independent sample blocks, enabling simultaneous processing of multiple sample types and assays.

Automatically generated - may contain errors

3 protocols using abi quantstudio 6 flex rt pcr system

1

Adrenal Gene Expression Quantification

Check if the same lab product or an alternative is used in the 5 most similar protocols
Quantification of messenger RNA levels of Abcb1b, Sbsn, and Srd5a2 in the adrenal glands was carried out using qRT-PCR. Total RNA was reverse-transcribed using the High-Capacity cDNA Reverse Transcription Kit (Applied Biosystems). RT-PCR reactions were run in triplicate using the ABI QuantStudio 6 Flex RT-PCR System and data were collected using the QuantStudio RT-PCR software (Applied Biosystems). Expression levels were calculated using the standard curve, absolute quantification method. The endogenous expressed gene Hprt was used to normalize the data. The following Taqman probes were used: Abcb1b: Mm00440736_m1, Sbsn: Mm00552057_m1, Srd5a2: Mm00446421_m1, and Hprt: Mm00446968_m1.
+ Open protocol
+ Expand
2

Quantitative RT-PCR Analysis of Osteoclastogenesis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was extracted from cells using the RNeasy Mini kit (Qiagen, Hilden, Germany) according to the manufacturer’s instructions. The same quantity of total RNA was reverse-transcribed to cDNA using TaqMan reverse transcription reagents (Applied Biosystems, Foster City, CA, USA). Quantitative RT-PCR was performed using the ABI QuantStudio 6 Flex RT-PCR system with the TaqMan Universal PCR Master Mix (Applied Biosystems). The primers used in this study were c-Fos (Mm00487425_m1), nuclear factor of activated T-cells, cytoplasmic 1 (NFATc1, Mm00479445_m1), dendrocyte expressed seven transmembrane protein (DC-STAMP, Mm01168058_m1), ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2 (Atp6v0d2, Mm00656638_m1), and glyceraldehyde 3-phosphate dehydrogenase (GAPDH, Mm99999915_g1) from the TaqMan Gene Expression Assay (Applied Biosystems). All reactions were run in triplicate. Relative expression of the target genes was calculated using the ΔΔCt method with GADPH gene as internal reaction control and expressed as fold change relative to the control untreated with RANKL and WELC. Experiments were repeated three times, and results from one representative experiment were shown.
+ Open protocol
+ Expand
3

Quantitative Analysis of TGF-β1, Collagen I and III

Check if the same lab product or an alternative is used in the 5 most similar protocols
RT-PCR was used to quantitatively describe the mRNA expression of TGF-β1, collagen I and collagen III. Total RNA was extracted with TRIzol Reagent (Ambion, Austin, TX, United States) according to the manufacturer’s instructions. RT-PCR was performed on an ABI QuantStudio 6 Flex RT-PCR System (Applied Biosystems, United States) with the SYBR Green I incorporation method. The relative expression levels of mRNAs were calculated using the 2–ΔΔCt method. GAPDH was used as the internal control. The primers for related genes are listed in Table 1.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!