C. parvum IOWA oocysts were obtained from Bunch Grass Farm (BGF) (Deary, ID). A total of 108 oocysts were incubated in household bleach (diluted 1 : 4 in water) on ice for 10 min and then washed twice with cold phosphate-buffered saline (PBS). Excystation of sporozoites was induced by incubating oocysts in 0.8 % sodium taurodeoxycholate (Sigma) in PBS at 37 °C for 1 h. Small RNAs (<200 nt) were purified from excysted sporozoites according to the manufacturer’s protocols using the Nucleospin miRNA kit (Macherey-Nagel). The NEXTFLEX Small RNA-seq kit v3 was used to prepare a stranded small RNA library and the library was sequenced on the Illumina NextSeq 500 platform with 75 bp single-end reads (SE75). Library preparation and sequencing were conducted at the Georgia Genomics and Bioinformatics Core (GGBC, Athens, GA, USA).
Sodium taurodeoxycholate
Sodium taurodeoxycholate is a bile salt compound commonly used in laboratory settings. Its core function is to act as a surfactant, facilitating the solubilization and dispersion of various biomolecules and cellular components.
Lab products found in correlation
24 protocols using sodium taurodeoxycholate
Small RNA Profiling of C. parvum Sporozoites
C. parvum IOWA oocysts were obtained from Bunch Grass Farm (BGF) (Deary, ID). A total of 108 oocysts were incubated in household bleach (diluted 1 : 4 in water) on ice for 10 min and then washed twice with cold phosphate-buffered saline (PBS). Excystation of sporozoites was induced by incubating oocysts in 0.8 % sodium taurodeoxycholate (Sigma) in PBS at 37 °C for 1 h. Small RNAs (<200 nt) were purified from excysted sporozoites according to the manufacturer’s protocols using the Nucleospin miRNA kit (Macherey-Nagel). The NEXTFLEX Small RNA-seq kit v3 was used to prepare a stranded small RNA library and the library was sequenced on the Illumina NextSeq 500 platform with 75 bp single-end reads (SE75). Library preparation and sequencing were conducted at the Georgia Genomics and Bioinformatics Core (GGBC, Athens, GA, USA).
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