The largest database of trusted experimental protocols

18 protocols using imager 600 system

1

Protein Expression Analysis of Frozen RV

Check if the same lab product or an alternative is used in the 5 most similar protocols
Frozen RV was homogenized using ice-cold lysis buffer and proteinase inhibitor cocktail (Manchini et al., 2014 (link)). Lysates corresponding to 30 μg of protein were subjected to 10% SDS-PAGE. Separated proteins were transferred to PVDF membrane (Amersham Biosciences, NJ, USA) and transfer effectiveness was examined with 0.5% Ponceau S. After blocking with 5% non-fat dry milk for 2 h at room temperature, PVDF membranes were probed with Abcam (Cambridge, MA, USA) primary antibodies for rabbit ant-Akt1 (1:5000), rabbit anti-p-Akt1 (1:2500), rabbit anti-Caspase3; rabbit anti-Bax (1:1000), rabbit anti-Bcl-2 (1:1000), rabbit anti-Bcl-xL (1:500), rabbit anti-β-MHC (1:5000), rabbit anti-α-MHC (1:5000), rabbit anti-L-type Ca++ (1:500), rabbit anti-ryanodine receptor (1:1000), rabbit anti-Serca 2 (1:1000), and rabbit anti-Na+/Ca++ exchanger (1:100) in overnight incubation. Membranes were then washed five times with PBS and incubated for 1 h with horseradish peroxidase-conjugated goat anti-rabbit (1:20,000; Zymed, CA, USA). Membranes were again washed five times with blocking buffer and then rinsed twice with PBS. Antibodies binding were detected by chemiluminescence reagents (Amersham Biosciences, NJ, USA), and images were captured using an Amersham Imager 600 system. Quantification of target proteins was normalized for the internal control glyceraldehyde 3-phosphate dehydrogenase.
+ Open protocol
+ Expand
2

Protein Expression Analysis by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
The protein samples were separated by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE), followed by transferring onto nitrocellulose filter membrane (Biosharp, 20030). The membranes were blocked with 5% skim milk in tris-buffered saline with 0.1% tween 20 (TBST) for 2 h and then incubated with the anti-N (1:1000), anti-P (1:1000), anti-M (1:1000), anti-G (1:1000), anti-L (1:1000), anti-hnRNPA1 (1:1000), anti-Flag (1:2000), anti-Myc (1:4000), anti-HA (1:4000), anti-EGFP (1:2000), anti-Histone H3 (1:4000), or anti-β-actin (1:5000) antibodies for 4 h. After three-time washing with TBST, the membranes were incubated with HRP-conjugated goat anti-rabbit antibody (1:5000) or anti-mouse antibody (1:5000) for 1 h. The signal intensity was visualized using Amersham Imager 600 System after washing with TBST for three times.
+ Open protocol
+ Expand
3

Quantifying ERα Protein Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
To analyze ERα protein expression, total protein from each sample was first isolated from L3-L5 vertebrae by homogenization with RIPA buffer (Solarbio) followed by sonication. Protein concentrations were found for lysates using BCA assay. For ERα protein expression in Raw 264.7 cells (+/− 20 ng/ml RANKL) cells were cultured onto 6 well tissue culture plates with either control, 1 μM ZA or 100 ng/ml rmCst6 treatments and incubated at 37° C for 48 hr. (2.5 × 105 cells/ml, 2 ml total volume). After 48 hr. cells were lysed using RIPA buffer and protein concentration was found using BCA assay. Both protein tissue and protein cell samples were prepared for SDS PAGE, equal amount of protein were loaded for each sample and then ran on 10% Acrylamide/Bis-acrylamide gels (N = 6 for bone tissue, N = 3 for Raw 264.7 cells). Following membrane transfer, mouse anti h/m/r ERα (MAB57151, R&D Systems) was used as the primary antibody and HRP conjugated anti-mouse IgG (R&D systems, HAF018) was used as the secondary antibody. Bands of interest were visualized and imaged under chemiluminescent detection using the Amersham Imager 600 System. Amido black staining (for tissue lysate samples) and mouse anti β-actin antibody (Sigma, A1978) (for cell lysate samples) were used as loading controls for western blots. Densitometry analysis of western blot bands was performed using ImageJ.
+ Open protocol
+ Expand
4

Protein Extraction and Immunoblotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins were extracted from cultured cells using a modified buffer (50 mM Tris-HCl (pH 7.5), 1% Triton X-100, 150 mM NaCl, 0.5 mM EDTA, 1 mM dithiothreitol, and protease inhibitor cocktail and phosphatase inhibitor cocktail), followed by immunoprecipitation and immunoblotting with the corresponding antibodies. The protein concentration was determined using the Bradford assay. Protein from cellular lysates was separated by 12% SDS-PAGE and transferred onto PVDF membrane. The membranes were blocked with 5% non-fat mike for 2 h at room temperature and probed with the indicated antibodies at 4 °C overnight. The membranes then were probed with secondary antibody and visualized by Enhanced Chemiluminescence (ECL) substrate using Amersham Imager 600 system.
+ Open protocol
+ Expand
5

Ischemic Penumbra Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
After 24 h of reperfusion, rat brain tissue from the ischemic penumbra was collected and lysed in high-efficiency RIPA lysis buffer containing PMSF. The protein concentration was determined using a BCA assay. Equal amounts of protein were loaded and separated on 10–12% sodium dodecyl sulfate-polyacrylamide gels and then transferred onto polyvinylidene difluoride (PVDF) membranes in Tris-glycine transfer buffer. The membranes were blocked with 5% skim milk for 1 h at room temperature and incubated with a primary antibody against β-actin (1:1000), β-tubulin (1:1000), Iba1 (1:1000), CD40 (1:1000), CD68 (1:1000), CD206 (1:1000), GPER (1:1000), P65-NF-κB (1:1000), p-P65-NF-κB (1:1000), ERK (1:1000), or p-ERK (1:1000) at 4 °C overnight. The membranes were then incubated with a goat anti-mouse secondary antibody (1:5000; LI-COR, USA) or goat anti-rabbit secondary antibody (1:5000; LI-COR, USA) at room temperature for 1 h. The bands corresponding to the antigen–antibody complexes were detected using Super Signal West Pico Chemiluminescent Substrate and visualized with an Amersham Imager 600 system.
+ Open protocol
+ Expand
6

Protein Quantification and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed in RIPA Lysis Buffer (Beyotime, Shanghai, China) with protease inhibitor cocktail. The total protein concentration was determined using a bicinchoninic acid (BCA) protein assay kit (Beyotime). Equal amounts of total proteins (50 μg) per well were separated with SDS-PAGE (80 V for 30 min, 120 V for 1 h) and transferred to the PVDF membrane (Cytiva, Marlborough, MA, USA) (200 mA for 2 h). Membranes were blocked with 5% non-Fat Milk in TBST for an hour. Cut membranes were incubated with indicated primary antibodies overnight at 4 °C and HRP-labeled secondary antibodies for 2 h. Protein bands were imaged in Amersham Imager 600 system. Photo densitometric data of protein bands were analyzed and quantified with ImageJ.
+ Open protocol
+ Expand
7

Protein Interaction Analysis by IP and Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
293T cells grown in T25 culture disk (5 × 106 cells per disk) were transfected with indicated 5 μg of plasmids using TransIntro® EL Transfection Reagent (TransGen Biotech) following the manufacturer’s instructions. At 24 h post transfection, plasmid-transfected cells were collected and lysed with cell lysis buffer (Beyotime). The lysates were cleared by centrifugation at 12,000 rpm and subjected to IP using specific antibodies according to the manufacturer’s instructions of protein A/G magnetic beads (MCE). The final solution was separated into 10% SDS-PAGE and transferred to 0.2 μm nitrocellulose membranes (Biosharp). Membranes were blocked for 2 h at room temperature in 5% skim milk dissolved in tris-buffered saline with 0.1% tween 20 (TBST) and incubated with the indicated primary antibodies for 2 h at room temperature. The membranes were washed three times with TBST and incubated with HRP-conjugated goat anti-rabbit antibody or anti-mouse antibody for 1 h at room temperature. The signal intensity was then determined using Amersham Imager 600 System.
+ Open protocol
+ Expand
8

Quantifying Apoptosis Regulators in Breast Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blotting technique as a gene expression analysis investigated Caspase 7, 3, 9, Bcl-2, Bax, and GAPDH protein levels. To reach this goal, MDA-MB-231 cells (106 cells/well), after being treated with free DTX-loaded NPs and DTX in IC50 doses, were harvested and homogenized with cold RIPA lysis buffer [Tris-HCl (pH = 8, 500 μL], one tablet of protease inhibitor cocktail, NaCl (80 mg), EDTA (3 mg), Triton NP40 (1%, 10 μL), SDS (10 mg), and sodium deoxycholate (25 mg) at 4 °C. Cell lysates were centrifuged (12,000 g, 20 min). The above liquid was collected and analyzed using the Bradford assay and a spectrophotometer for protein determination. After SDS-PAGE separation, the target proteins were transferred to the PVDF membrane (10 μg protein loaded/ well). Then blots were blocked with TBST buffer containing 5% (w/v) nonfat dry milk (0.1% v/v Tween®20-tris buffered saline: TBST, and membranes were exposed with antibodies against caspase 3, 9, 7, Bcl-2, Bax and GAPDH at room temperature for 60 min. Increased chemiluminescence was used to visualize Immuno-reactive bands. Amersham®Imager 600 system analyzed all the measurements and was determined using Image J 1.52 n software after normalization to identify protein band intensities. The western blot uses the GAPDH expression as the control.
+ Open protocol
+ Expand
9

Western Blot Analysis of Chromatome, Proteome, and Histones

Check if the same lab product or an alternative is used in the 5 most similar protocols
8 μg of the chromatome and full proteome extracts and 1 μg of acid histone extracts were separated on SDS-PAGE. Proteins were transferred onto a nitrocellulose membrane and incubated with an antibody against QSER1 (Abcam, ab86072, 1:1000) or H3K9me3 (Abcam, ab8898, 1:1000). The secondary antibody of goat-anti-rabbit IgG (H + L)–HRP conjugate was used with a dilution of 1:5000. Blots were developed with the Pierce ECL western blotting substrate (Thermo Scientific, 32109) and scanned by the Amersham™ Imager 600 system.
+ Open protocol
+ Expand
10

Neuronal Protein Analysis by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein samples were collected from neurons cultured in 60 mm dishes (4.5 × 106/well) that were treated with lysis buffer (50 mM Tris–HCl pH 7.5, 250 mM NaCl, 10 mM EDTA, 0.5%, NP-40, 10 μM leupeptin, 1 mM PMSF, and 4 mM NaF). Thirty micrograms of total protein was separated by 10% SDS-PAGE and then was transferred to PVDF membranes (Millipore, CA, United States). The membranes were blocked with 5% skim milk and then were incubated with primary antibodies against GluN2A (1:400, ab227233, Abcam, United Kingdom), p-GluN2B (1:200, ab81271, Abcam, United Kingdom), GluN2B (1:400, ab65783, Abcam, United Kingdom), p-DAPK1 (1:200, D4941, Sigma, United States), DAPK1 (1:400, 3008S, Cell Signaling Technology, United States), p-ERK (1:200, 4370S, Cell Signaling Technology, United States), ERK (1:200, sc93, Santa Cruz Biotechnology, United States) and β-tubulin (1:1000, K106281P, Solarbio, China). After washing with TBS-T for 5 min for a total of 3 times, HRP-conjugated secondary antibodies (goat anti-rabbit IgG, rabbit anti-goat IgG, and goat anti-mouse IgG) were applied to the blots. The blots were developed using ECL Western blotting detection reagents (Thermo Fisher Scientific, Waltham, MA, United States). The band densitometry was analyzed using an Amersham Imager 600 system.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!

  Request a quote for « Imager 600 system »