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Lipofectomine 2000

Manufactured by Thermo Fisher Scientific

Lipofectomine 2000 is a lipid-based transfection reagent used for the delivery of nucleic acids, such as DNA and RNA, into eukaryotic cells. It facilitates the uptake of these molecules by cells, enabling researchers to study gene expression, knockdown, or other applications.

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3 protocols using lipofectomine 2000

1

Overexpression of human POT1 variants

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The WT and mutant full-length human POT1 genes were cloned in the pLU-EF1A-iBlast (pLU) vector with an N-terminal 1xFlag tag and 4 μg of vector was used to transfect HEK 293T cells using lipofectomine 2000 (Invitrogen) to test expression. HEK293T cells were cultured in growth medium containing Dulbecco's modified Eagle medium (Cellgro) supplemented with 10% fetal bovine serum (Sigma) and 100 units ml−1 penicillin and 100 μg ml−1 streptomycin (Sigma). All human cells were cultured at 37 °C with 5% CO2 and harvested 48 h after transfection.
Stable HEK293T cell lines overexpressing 1xFlag-POT1 were carried out using lentiviral infection to deliver WT and mutant human POT1 genes in the pLU vector with blasticidin resistance. A pLKO.1 vector with puromycin resistance carrying the shRNA (TRCN0000009837) targeting the 3′UTR of endogenous POT1 (shPOT1) was obtained from the Sigma Mission shRNA library and was delivered with lentiviral infection. Lentiviral particles were prepared by lipofectomine 2000 (Invitrogen) transfection of HEK293T cells with the pLU or pLKO.1 and lentiviral production vectors. Growth media was spiked with 5 μg ml−1 blasticidin S, and 2 μg ml−1 puromycin.
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2

Luciferase Assay for siRNA Screening

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RNA interference was performed by using siRNA purchased from Sigma MISSION siRNA library (SI007 siRNA Fluor Universal Negative Control#1, and PDSIRNA2D SASI_Hs01_00150279 siJUN). HEK293T cells were seeded at 35,000 cells/well in a 96-well plate. On Day 0, cells were co-transfected with 150 ng siRNA and myc luciferase reporter per well according to previous protocol using Lipofectomine 2000 (Invitrogen, 11668019). On Day 1, 24 hours post-transfection, 75 μL of fresh media containing vehicle DMSO or EN4 was added to cells in n=6 replicates. After 24 h of compound treatment, Dual-Glo luciferase (Promega, E2920) workup was performed according to manufacturer’s protocol. Firefly and Renilla luminescence were read on a SpectraMax i3 plate reader. Background luminescence was subtracted using a blank control then Firefly:Renilla was calculated for each individual well.
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3

Generating shRNA Knockdown of Septin-2

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shRNA for human septin-2 (Santa Cruz Biotechnology, sc-40936-SH) or scrambled oligonucleotide control shRNA (Plasmid-C; Santa Cruz Biotechnology, sc-108066) was transfected into SKOV3WT cells using Lipofectomine® 2000 (Invitrogen, 11668) following the manufacturer’s instructions. Individual single cells were selected by culturing under the pressure of 5 ug/mL of puromycin (Research products International, 58-58-2), and clonal populations were allowed to expand. Phenotypes of the clones were evaluated by Western blotting using anti Septin-2 antibody (Novus Biologicals, NBP1-85212).
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