The largest database of trusted experimental protocols

8 protocols using pha 665752

1

Inhibitor Screening and Cell Treatment

Check if the same lab product or an alternative is used in the 5 most similar protocols
Imatinib (1 μM) was purchased from Tocris Bioscience. BKM-120 (5 μM) was purchased from Active Biochemical Co. dimethyl sulfoxide (DMSO) was purchased from Sigma-Aldrich. NVP-AEW541 (5 μM) was purchased from Selleck. Bortezomib (50 nM) was purchased from LC Laboratories, GSK11220212 (250 nM) was provided by the Cantley lab (BIDMC). Cells in normal growth conditions, 70% confluence, were treated with inhibitors for one hour prior to lysis using DMSO as vehicle.
PHA-665752 was purchased from Tocris. Gefitinib (1 μmol/L) were obtained from American Custom Chemical. TAE-684 (100 nmol/L) was purchased from Selleck. Rapamycin (50 nmol/L) was purchased from Sigma. Cells in normal growth conditions, 70% confluence, were treated with inhibitors for 6 hour, except for Rapamycin, which was used for 16 hours prior to lysis using DMSO as vehicle.
+ Open protocol
+ Expand
2

Preparation and Storage of Cell Signaling Reagents

Check if the same lab product or an alternative is used in the 5 most similar protocols
PHA-665752 and PD-173074 were obtained from Tocris Bioscience (Bristol, UK). Lapatinib was obtained from Bio Vision (Milpitas, USA). Recombinant human HGF, recombinant human FGF1, 7, and 10 were obtained from R & D System (Minneapolis, USA). Stock solutions of PHA-665752, PD-173074 and Lapatinib were prepared in dimethyl sulfoxide and stored at −80°C until use. Stock solutions of HGF and FGFs were prepared in phosphate-buffered saline (PBS) and stored at −80°C until use.
+ Open protocol
+ Expand
3

Monoclonal and Polyclonal Antibodies for Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Monoclonal antibody to p53 and polyclonal antibodies to EGFR, MET, and AXL were from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Monoclonal antibodies to AKT1 and S6, and polyclonal antibodies to AKT, AKT2, and AKT3 were from Cell Signaling Technology (Beverly, MA, USA). Antibodies to MAPK, MDM2, and p21 were from Zymed/Invitrogen Laboratories (Invitrogen life Technologies, Carlsbad, CA, USA). All phospho-specific antibodies were from Cell Signaling Technology. Polybrene, puromycin, and antibody to β-actin were from Sigma-Aldrich (St Louis, MO, USA). Lentiviral shRNA constructs were from The RNAi Consortium (TRC, Cambridge, MA, USA), and included AXL: 5′-GCTGTGAAGACGATGAAGATT-3′; AKT1: 5′-CGCGTGACCATGAACGAGTTT-3′ (shRNA1), 5′-CGAGTTTGAGTACCTGAAGCT-3′ (shRNA2), 5′-CTATGGCGCTGAGATTGTGTC-3′ (shRNA3); and AKT2: 5′-CTTCGACTATCTCAAACTCCT-3′ (shRNA1), 5′-CAAGGTACTTCGATGATGAAT-3′ (shRNA2); and AKT3: 5′-AGAAACCTCAAGATGTGGATT-3′ (shRNA1), 5′-TGGCACACACTCTAACTGAAA-3′ (shRNA2).
Gefitinib, LY294002, U0126, GDC0941, and everolimus (RAD001) were obtained from LC Labs (Woburn, MA, USA). PHA-665752 was from Tocris Biosciences (St Louis, MO, USA). BEZ235 was from Axon MedchemBV (GZ Groningen, the Netherlands). All inhibitors were reconstituted in DMSO.
+ Open protocol
+ Expand
4

Sciatic Nerve Transection and Treatment

Check if the same lab product or an alternative is used in the 5 most similar protocols
All surgical protocols were approved by the International Animal Care and Use Committee at Seoul National University. For sciatic nerve transection, 10-week-old male C57BL/6 mice were anesthetized with isoflurane. The sciatic nerve of the right leg was cut, and a 3-mm piece was excised. To prevent nerve reattachment, severed nerve endings were tied with 6-0 black silk suture (AILEE, Pusan, Korea). Then the incision was sutured using 5-0 silk suture (AILEE, Pusan, Korea). Sham surgery was performed by following the same procedure without severing the sciatic nerve. PHA-665752 (Tocris Bioscience, MO), a c-met inhibitor, was dissolved in DMSO (Sigma-Aldrich, MO) and administered i.p. to each mouse on a daily basis with a dose of 20 mg/kg. For i.m. injection, a 0.3-mm needle size and 0.5 mL insulin syringe (BD Biosciences, NJ) were used. The pCK or pCK-HGF-X7 plasmid expression vector was dissolved in 50 μL PBS (2 μg/μL). The injection procedure was performed by injecting the needle parallel to the tibia and then delivering the plasmid into the middle of the TA muscle.
+ Open protocol
+ Expand
5

Muscle Injury and Regeneration Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
All surgical protocols were approved by the International Animal Care and Use Committee at Seoul National University. For muscle injury, ten-week-old male C57BL/6 mice were anesthetized with isoflurane, and the TAs were injected with 50 μl CTX (Latoxan, Valence, France), diluted to 10 μM in phosphate buffered saline (PBS). Sham treatment was performed by following the same procedure except injecting TAs with PBS. PHA-665752 (Tocris Bioscience, MO), a c-met inhibitor, was dissolved in DMSO (Sigma Aldrich, MO) and i.p. administered in each mouse on a daily basis with a dose of 20 mg/kg. For i.m. injection, 0.3 mm needle size, 0.5 ml insulin syringe (BD, NJ) was used. pCK or pCK-HGF-X7 plasmid expression vector was dissolved in 50 μl PBS (2 μg/μl). The injection procedure was performed by injecting the needle parallel to the tibia and then delivering plasmid into the middle of the TA.
+ Open protocol
+ Expand
6

Small Molecule Inhibitor Panel

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ceritinib, alectinib, lorlatinib, cabozantinib, and zoligratinib were purchased from ActiveBiochem. Crizotinib, brigatinib, and infigratinib were purchased from Biochempartner. AZD4547 was purchased from Selleck, and PHA665752 was purchased from Tocris Bioscience.
+ Open protocol
+ Expand
7

Antibody Preparation and Reagents

Check if the same lab product or an alternative is used in the 5 most similar protocols
MUC20 antibody was prepared as described in our previous study [24 (link)]. Antibody against β-actin (A5441) was obtained from Sigma. Antibodies against MET (GTX100637), AKT (GTX121937), NFκB (GTX102090), and p-NFκB (GTX50098) were purchased from GeneTex Inc. (Irvine, CA, USA). Antibodies for immunoprecipitation of MET (#8198) and for MET pY1234/5 (#3077), p-AKT (#4060), ERK (#9102), and p-ERK (#9101) were purchased from Cell Signaling Technology, Inc. (Danvers, MA, USA). Recombinant HGF was purchased from Sigma. PHA665752, MET inhibitor, was purchased from Tocris Bioscience (Bristol, UK). SP600125, JNK inhibitor, was purchased from Selleckchem (Houston, TX, USA).
+ Open protocol
+ Expand
8

Combinatorial Targeting of Proliferation Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
For growth curve and cell viability assays, MB cells or hNSCs were seeded in 24-well plates at the same density. Cells were treated for 72 h with mTOR (rapamycin, Sigma; Torin1, Calbiochem), FLT3 (TCS359, SelleckChem) or MET (PHA665752, Tocris) inhibitors or with inositol hexakisphosphate (IP6, Sigma) at the indicated concentrations. At specific time points or after appropriate treatment, cells were harvested, and the number of viable cells was counted with a haemocytometer and Trypan Blue staining or with CyQUANT Direct Red Cell Proliferation Assay Kit (ThermoFisher Scientific). Syenrgy/antagonist effect of the combined treatment was identified by Loewe Model with Combenefit software88 (link). Apoptosis was assessed with Caspase-3 Colorimetric Assay kit (ab39401, Abcam) following the manufacturer’s protocol. Briefly, cells treated with increasing concentrations of IP6 were lysed, and 50 µg of protein lysate was incubated with DEVD-AFC substrate and reaction buffer for 2 h at 37 °C.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!