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34 protocols using hepa1 6 cells

1

Adenoviral vector propagation in murine cells

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Eight to twelve week old C3H/HeN mice (Charles River, Sulzfeld, Germany) were maintained under standard SPF conditions. Animal studies were performed according to the local regulatory guidelines. Human embryonic retinoblasts 911 cells [25 (link)] were used to propagate E1-deleted adenoviral vectors (Ad). Murine hepatoma cells Hepatoma129 (Hepa129) were obtained by the DCT Tumor Repository, Frederick, Maryland. Hepa129 and murine Hepa1–6 cells (ATCC CRL-1830) were maintained in RPMI1640 with fetal calf serum (PAA, Cölbe, Germany).
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2

Characterization of Quantum Dots for Cell Studies

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Ilium xylazile and ketamine hydrochloride were purchased from Bayer Australia (Pymble NSW, Australia). Hepa 1-6 cells were obtained from ATCC (Manassas, VA, USA) and maintained in vitro under cell culture conditions recommended by ATCC.
QDs were mercaptosuccinic acid (MSA, Sigma-Aldrich, MO, USA) capped cadmium telluride/cadmium sulfide (CdTe/CdS, Sigma-Aldrich) particles, recently developed in our laboratory [4 (link)]. These QDs have an average particle diameter of 3.5 nm determined by transmission electron microscopy (JEOL1010, JEOL, Tokyo, Japan). The hydrodynamic diameter of these QDs was measured to be 4.2 nm. They display abroad excitation (<500 nm) with an emission peak of about 630 nm. The zeta potential measured was −37 mV [4 (link)].
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3

Primary Hepatocyte and Hepa1-6 Cell Culture

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Cell culture were conducted using primary hepatocytes or cryopreserved Hepa1–6 cells (ATCC). Please refer to individual sections below and Figure Legends for the specific stimulation condition used for each assay. Cells were incubated in standard conditions: 37° C with 5% CO2.
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4

Hepa 1-6 Subcutaneous Tumor Growth and Metastasis

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HEPA 1-6 cells (ATCC, Manassas, VA, USA) were cultured in Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% fetal calf serum, 50 U/mL penicillin, and 50 µg/mL streptomycin in humified atmosphere at 37 °C and 5% CO2. Syngeneic Hepa 1-6 tumor cells (5 × 106) were subcutaneously injected into the flank of Dhx15+/− and wild-type mice (n = 10). Primary tumor growth was controlled during the first 5 weeks. Tumor growth was monitored by measuring volumes using a digital slide-caliper. Tumor volume was calculated by the following formula: V = 4/3 × π × (length × depth × width). Primary tumors were fixed in 4% PFA and cryopreserved in tissue-tek O.C.T. compound (Sakura, Flemingweg, The Netherlands). The post-surgical metastasis model was performed as follows: five weeks post-injection, Hepa 1-6-injected mice were sacrificed, and the liver was extracted to perform metastasis analyses. Tile scan images of hematoxylin–eosin (H&E)-stained paraffin liver sections were visualized using an Olympus BX51 microscope equipped with DP71 camera (Olympus Europa SE & CO.KG., Hamburg, Germany), and the percentage of hepatic metastatic area as percent of total hepatic area was measured with ImageJ software (ImageJ version 1.52b; National Institutes of Health, Bethesda, MD, USA).
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5

Culturing and Transplanting Primary Hepatocytes

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Primary hepatocytes were isolated from P240 PR-SET7ΔHepA mice using collagenase perfusion protocol (Tatarakis et al, 2008 (link)). The cells were seeded to tissue culture plates coated with 50 μg/ml rat collagen (type 1) and cultured in a medium containing DMEM/F12, 10% fetal bovine serum (FBS), 5 μg/ml insulin, 5 μg/ml transferin, 5 ng/ml selenious acid, 10−7 M dexamethasone and 20 ng/ml EGF. The cells could survive at least four passages in the same culture conditions without significant loss of growth rate. About 106 cultured primary cells were mixed with BD-Matrigel matrix in 1:1 ration and injected into the right flank of two-month-old Rag1−/−mice. As a control, the same number of Hepa 1–6 cells (ATCC) was used for injection. Subcutaneous tumors were isolated, and their volume was measured at various times after the initial injection.
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6

Caspase-3 Activation in Hepa1-6 Cells

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To generate positive controls for caspase-3 Western blots, Hepa1-6 cells (ATCC; CRL-1830) were maintained in DMEM (Corning; 10–013-CV) with 10% FBS (VWR) and 1% penicillin-streptomycin (Sigma-Aldrich). Staurosporine (Cayman Chemical) was administered at 5 µM for up to 24 h.
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7

Propagation and Cultivation of Rodent Malaria Parasites

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P. berghei and P. yoelii blood stage parasites were propagated in female Swiss mice (6–8 weeks old, from Janvier Labs). We used wild type P. berghei (ANKA strain, clone 15cy1) and P. yoelii (17XNL strain, clone 1.1), and GFP-expressing PyGFP and PbGFP parasite lines, obtained after integration of a GFP expression cassette at the dispensable p230p locus.25 (link)
Anopheles stephensi mosquitoes were fed on P. berghei or P. yoelii-infected mice using standard methods,72 (link) and kept at 21°C and 24°C, respectively. P. berghei and P. yoelii sporozoites were collected from the salivary glands of infected mosquitoes 21–28 or 14–18 days post-feeding, respectively. P. berghei and P. yoelii sporozoite infections were performed in female C57BL/6 or BALB/c mice, respectively (6 weeks old, from Janvier Labs), by intravenous injection in a tail vein. HepG2 (ATCC HB-8065), HepG2/CD8138 (link) and Hepa1-6 cells (ATCC CRL-1830) were cultured at 37°C under 5% CO2 in DMEM supplemented with 10% fetal calf serum and antibiotics (Life Technologies), as described.7 (link) HepG2 and HepG2/CD81 were cultured in culture dishes coated with rat tail collagen I (Becton-Dickinson).
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8

Cell Culture of 3T3-L1, Hepa1-6, and MEF Cells

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3T3-L1 cells (ATCC, Manassas, VA) were propagated in Dulbecco's Modified Eagle's Medium (DMEM) containing 25 mM glucose, 1 mM sodium pyruvate (Life Technologies, Grand Island, NY) and 9% newborn calf serum (JR Scientific, Woodland, CA). Hepa1-6 cells (ATCC, Manassas, VA; a murine hepatoma cell line) and embryonic fibroblast cells derived from wild-type C57BL/6 mice (MEFs) were propagated in DMEM supplemented with 25 mM glucose and 9% fetal bovine serum (FBS; PAA Laboratories, Dartmouth, MA). All cells were propagated at 37 °C in a 5% CO2 atmosphere.
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9

Culturing HeLa and Hepa 1-6 Cells

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HeLa cells and Hepa 1-6 cells were purchased from ATCC. Cells were cultured at 37°C under a 5% CO2 atmosphere in DMEM (containing 4.5 g/L of glucose) supplemented with 10% fetal bovine serum (Thermo Fischer Scientific), 100 IU/mL of penicillin G, and 100 μg/mL of streptomycin sulfate. Unless otherwise specified, cells were seeded at a density of between 6 × 103 and 1 × 104 cells per well in a 96-well plate, depending on the experiment.
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10

Hepa1-6 Cell Culture Protocol

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For a list of antibodies, stains, and cytokines used, clone and/or catalogue numbers, and companies from which they were purchased, see Supplementary Table S1. For qPCR primers and shRNA constructs, see Supplementary Table S2. Hepa1–6 cells [Hepa1–6][ATCC®CRL-1830™] were purchased directly from ATCC which validates by short tandem repeat profiling, and passaged for fewer than 6 months after receipt, with frozen stocks of both naïve and GFP-labeled luciferase reporter-expressing Hepa1-6 cells (Hepa1-6-GFP-Luc) being thawed prior to use. Recombinant IL18BP was generated as described in (32 (link)).
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