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3 protocols using sb203580

1

Proteostasis Regulation by Redox Modulators

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Chemicals and reagents were obtained as follows: bortezomib (Bz) and carfilzomib (Cfz) from Selleckchem (Houston, TX, USA); Necrostatin-1, bafilomycin A1, N-acetyl-L-cysteine (NAC), and H2O2 from Sigma-Aldrich (St Louis, MO, USA); cycloheximide (CHX), SP600125, PD98059, and Manganese (III) tetrakis (4-benzoic acid) porphyrin chloride (MnTBAP) from Calbiochem (EDM Millipore Corp., Billerica, MA, USA); Auranofin (AF) from AdipoGen (Liestal, CH, Switzerland); MitoTracker-Red (MTR), propidium iodide, and 5-(and-6)-chloromethyl-2′,7′-dichlorofluorescein diacetate (CM-H2DCF-DA) from Molecular Probes (Eugene, OR, USA); z-VAD-fmk from R&D systems (Minneapolis, MN, USA); Glutathione reduced ethyl ester (GSH-OEt) from Chemodex (Gallen, CH, Switzerland); SB203580 from Tokyo Chemical Industry (TCI, Tokyo, Japan); CDDO-ME from Cayman (Michigan, USA). The following primary antibodies were used: TrxR1 (HPA001395) from Sigma-Aldrich; Ubiquitin (sc-8017) and β-actin (sc-47778) from Santa Cruz Biotechnology (Santa Cruz, CA, USA); ATF4 (#11815), p-eIF2α (#9721), eIF2α (#9722), and CHOP/GADD153 (#2895) from Cell Signaling Technology (Danvers, MA, USA); CHAC1 (15207-1-AP) from Proteintech (Rosemont, IL, USA). The secondary antibodies (rabbit IgG HRP(G-21234) and mouse IgG HRP (G-21040)) were from Molecular Probes.
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2

Protein Expression Analysis Protocol

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Protein expression was determined in cell lysates from each treatment group at the same treatment manner with previous experiments. A 30-µg protein aliquot underwent sodium dodecyl sulfate–polyacrylamide gel electrophoresis and separated proteins were transferred to polyvinylidene fluoride membranes. The blots were blocked in 5% bovine serum albumin and probed with primary antibodies: anti-iNOS (ab15323), anti-COX2 (CST#2282), anti-phospho-ERK (CST#4376), anti-ERK (CST#4695), anti-phospho-JNK (CST#4668), anti-JNK (CST#9252), anti-phospho-p38 (CST#4511), anti-p38 (CST#9212), and followed by incubation with a horse radish peroxidase-conjugated secondary antibody. Protein bands were detected using a chemiluminescent substrate and images acquired using ImageQuant LAS 4000 (GE Healthcare, Buckinghamshire, UK). Relative protein band intensity was normalized to β-actin or GAPDH expression using ImageJ. SB203580 (Tokyo Chemical Industry, Japan) is a specific p38-α inhibitor and was used as a positive control for p38 phosphorylation inhibition.
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3

Melatonin-Mediated Modulation of Cell Death

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Reagents Melatonin, phenylarsine oxide, necrostatin-1 (RIPK1 inhibitor), necrosulfonamide (RIPK3 inhibitor), Z-VAD-FMK (pan-caspase inhibitor), EGTA (extracellular calcium chelator), SB203580 (p38 inhibitor), 4-PBA (ER stress inhibitor), and BAPTA-AM [1,2-bis(2-aminophenoxy)ethane-N,N,N 0 ,N 0 -tetraacetic acid tetrakis-(acetoxymethyl)ester] (intracellular calcium chelator) were purchased from Tokyo Chemical Industry, Japan. JNK-IN-8 ( JNK inhibitor) was obtained from EMB Chemical, Inc. (San Diego, CA). TMRM, Rhod-2 AM, HE and DCFH-DA stains were purchased from Molecular Probes, Eugene, OR. Hoechst 33258, SYTOX, N-acetylcysteine (NAC; ROS scavenger), tauroursodeoxycholic acid (TUDCA; ER stress inhibitor) and all other reagents were purchased from Sigma Aldrich (St. Louis, MO) unless otherwise specified. Melatonin and phenylarsine oxide are prepared in DMSO, therefore the amount of DMSO in each sample was 0.2%. However, while using the inhibitors, the maximum amount of DMSO utilized in the sample was also added as a vehicle in the control non-treated and other samples to equalize the effect.
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