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Oligo dt

Manufactured by Tiangen Biotech
Sourced in China

Oligo (dT) is a synthetic oligonucleotide composed of a sequence of deoxythymidine nucleotides. It is commonly used in molecular biology applications as a primer for the synthesis of complementary DNA (cDNA) from messenger RNA (mRNA) templates.

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2 protocols using oligo dt

1

Viral RNA Extraction and Sequencing

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Viral RNA was extracted from the supernatants of rescued viruses using an RNA extraction kit. The purified viral RNA was reversely transcribed by oligo (dT) (Tiangen Biotech, Beijing, China) as a primer using M-MLV reverse transcriptase (Takara, Beijing, China) for the synthesis of complementary DNA. The primers used to amplify the screened regions for identifying the insertion sites are shown in Table S1. Subsequently, the RT-PCR products were separated, purified, and sequenced.
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2

Quantifying PDGF and IGF Expression

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The expression profiles of PDGF and IGF were measured using a one-step SYBR PrimeScript RT-PCR kit (Takara Bio, Inc., Otsu, Japan) in an ABI Prism 7500 (Applied Biosystems; Thermo Fisher Scientific, Inc.) following the manufacturer's protocol. An RNA reverse transcription kit, dNTP, RNase inhibitor and oligo-dT (all Tiangen Biotech Co., Ltd., Beijing, China) were used for RT-qPCR. The 20 µl reaction mixture contained 4 µl cDNA, 2 µl 10X buffer, 0.4 µl dNTP (10 mol/l), 0.4 µl primer mix and 0.5 U Taq polymerase and ddH2O. The qPCR procedure was as follows: Initial denaturation at 94°C for 2 min, followed by 30 cycles of denaturation at 94°C for 30 sec, annealing at 58°C for 30 sec and elongation at 72°C for 45 sec, with a final elongation at 72°C for 10 min and short storage at 4°C. The primer sequences utilized in RT-qPCR were as follows: PDGF, forward, 5′-GATCCGCTCCTTTGATGATC-3′ and reverse, 5′-GTCTCACACTTGCATGCCAG-3′; IGF, forward 5′-AAGCCTACAAAGTCAGCTCC-3′ and reverse, 5′-CGTCTTGTTTCCTGCACTTC-3′; and β-actin, forward, 5′-TGGTGGGTATGGGTCAGAAGGACTC-3′ and reverse, 5′-CATGGCTGGGGTGTTGAAGGTCTCA-3′. All primers were synthesized by Invitrogen; Thermo Fisher Scientific, Inc. The relative expression was analyzed using the 2−ΔΔCq method (6 (link)) and the expression of all transcripts were normalized to that of the housekeeping gene β-actin.
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