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6 protocols using cd8 pb

1

Surface Marker Profiling of Immune Cells

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Surface staining of BMC and spleen cells previously treated with erythrocyte lysis buffer (Qiagen) was performed with antibodies from BD Pharmingen against CD3-PE-Cy7, CD4-APC, CD8-PB, B220-APC, Ter119-PE-Cy7, CD11b-PE-Cy7, CD19-PE-Cy7, Gr-1-PE-Cy7, Gr-1-PB and Sca1-PB; cKit-APC from BioLegend (San Diego, CA, USA), and CD90.2-PE-Cy7 from eBioscience (San Diego, CA, USA) and measured using the CyanADP flow cytometer (Beckmann Coulter). Flow cytometry data were analyzed using the FlowJo 7.6 software (Tree Star, Inc., Ashland, OR, USA).
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2

Comprehensive Immune Cell Profiling

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Fluorochrome-conjugated anti-mouse monoclonal antibodies CD3-AF700 (cat # 100216), CD4-BV785 (cat # 100453), CD8-PB (cat # 100725), CD25-BV650 (cat # 102038), GITR-PECy7 (cat # 120222), ICOS-PECy5 (cat # 107708), IFNg-PeCy7 (cat # 505826), and IL-2-PB (cat # 503820) were purchased from Biolegend. CD44-Percp-cyanine5.5 cat# 45-0441-80, CD62L-APCeFL780 (cat # 47-0621-82), Foxp3-APC (cat# 17-5773-82), Eos-eFL660 (cat # 50-5758-80), Helios-PeCy7 (cat # 25-9883-42), Aiolos-PE (cat # 12-5789-80),and bCatenin-eFL660 (cat # 50-2567-42) were purchased from Thermo Fisher Scientific. PD-1-PECy7 (cat# 25-9985-80), CXCR5-BV421 (cat # 562889), Bcl-6-PE (cat # 569522), and phospho-STAT5-PE (pY694) (cat # 612567) were procured from BD Biosciences.
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3

Comprehensive CD4+ T-Cell Phenotypic Analysis

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For phenotypic analysis of CD4+-T, the following antibodies were used: CD4 PE (Clone RPA-T4), IFN-γ FITC (Clone B27), HLA-DR allophycocyanin (APC) (clone G46-6) (BD Pharmingen; BD Biosciences), CD3 PerCP (clone SK7) (Becton Dickinson, Franklin Lakes, NJ, USA); CD4 PB (Clone RPA-T4), CD8 PB (Clone RPA-T8), CD45RA PE/Cy7 (clone H100), CD25 PE (clone M-A251), CD127 PerCP/Cy5.5 (clone A019D5), CD185 APC/Cy7 (clone J252D4) (Biolegend); and CD54 Pacific Blue (clone HCD54), IL-17 efluor660 (eBioscience). Intracellular staining of FoxP3 was carried out with the anti-Human Foxp3 Staining Set APC (clone 236A/E7) (eBioscience). Flow cytometry was carried out on a FACS Canto II (BD Biosciences).
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4

Multicolor Flow Cytometry Analysis

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Blood, bone marrow, BAL, and lung cells were counted using an automated cell counter (Nexcelcom Bioscience, Lawrence, MA). Cells were incubated with Fc block (anti-mouse CD16/CD32; eBioscience) in 100 μl of FACS buffer (PBS, 0.5 % EDTA) followed by the antibody panels below. Labeled cells were analyzed using BD FACSCanto RUO (BD Biosciences, San Jose, CA) and the FlowJo data analysis software (Ashland, OR). Experiments represent an average of n = 5/group with up to 3 replicates. Antibodies used included: anti-mouse CD62L-APC, ICAM1-FITC, Ly6G-FITC, Ly6G-PerCP/Cy5.5, LFA-1-PE, CD45-APC/Cy7, CD4-PE, CD8-PB, CXCR2-PerCP/Cy5.5, Gr1-PB, Ly6C-PB (BioLegend, San Diego, CA), CD11C-APC, CD11b-PECy7, CD3e PE/Cy7, CD3e-PerCP/Cy5.5, CD71-PE, F4/80-APC (eBioscience).
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5

Multiparametric Flow Cytometry for Immune Cell Profiling

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Lung cells and splenocytes were isolated as described elsewhere (Engel et al., 2015) and stained with the following anti-mouse monoclonal antibodies for 20 min at 4 • C in the dark: CD45 PerCP, CD11b APC-Cy7, NK1.1 PE, CD19 FITC, CD3 APC, CD4 A700, CD8 PB, Gr1 PE, CD11b PE-Cy7, F4/80 APC, Siglec F APC-Cy7, CD11c PB (Biolegend, San Diego, USA or BD Bioscience, Heidelberg, Germany). Cell phenotyping was performed on LSRII flow cytometer using FACS Diva software (BD Bioscience, Heidelberg, Germany) and analyzed using FlowJo software (Tree Star Inc). Leukocytes were analyzed as follows: Neutrophils in spleen and lung (CD45+/CD11b high /Gr1 high ), Lymphocytes in spleen and lung (B cells: CD45+/CD11b-/CD19+; T cells: CD45+/CD11b-/ CD3+; NK cells: CD45+/NK1.1+/CD3-; NKT cells: CD45+/NK1.1+/ CD3+), alveolar macrophages (CD45+/Gr1-/SiglecF+/CD11c+), macrophages in spleen (CD45+/Gr1-/CD11b+/CD11c-).
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6

Flow Cytometric Cell Phenotyping

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Cell phenotyping was performed on an LSRII flow cytometer using FACSDiva software (BD Biosciences) and FlowJo software (Tree Star Inc.) with the following anti-mouse monoclonal antibodies: CD45-PE-Cy7, CD3-APC, CD4-A700, CD8-PB, NK1.1-PE, CD11b-APC-Cy7, B220-FITC, SiglecF-PE, F4/80-A700, CD11c-FITC, CD11b-PE-TR, Gr1-PB, and MHCII-APC-Cy7 (Biolegend). Fluorescence-activated cell sorter-based cell sorting was performed on a FACSAria III cell sorter (BD Biosciences).
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