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7 protocols using aggrecan

1

Chondrocytes Characterization in Scaffolds

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The chondrocytes/scaffolds composites after 7 and 14 days in culture were cut by cryosection in 8 μm thickness, then fixed in acetone for 30 min at room temperature (RT), and washed with PBS solution. On the one hand, some specimens were stained with hematoxylin and eosin (H&E), 0.1% toluidine blue, and 1% safranin O; on the other hand, the other samples were assessed by type I collagen (Abgent, USA), type II collagen (Abgent, USA), and aggrecan (Novus, USA) immunofluorescence staining. Secondary antibodies (Jackson, USA) and an Immunofluorescence Staining Kit (Vector Laboratories, UK) were used in accordance with the manufacturer's protocols. Negative controls were processed in parallel with no primary antibody.
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2

Western Blot Analysis of Cellular Proteins

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AF cells were collected as described. Total protein was extracted using RIPA Lysis Buffer (CWBio, China). Protein concentration was determined using a BCA Protein Assay Kit (CWBio, China). Then, equal protein samples in each group were separated by SDS/PAGE and transferred on to the nitrocellulose membranes. The nitrocellulose membranes were blocked by 5% BSA and then incubated with primary antibodies (GAPDH: CW0100, CWBio, China; aggrecan: NB120-11570, Novus, U.S.A.; Collagen I: ab90395, Abcam, U.S.A.; Cleaved caspase-3: #9664, Cell Signaling Technology, U.S.A.; Cleaved PARP: #5625, Cell Signaling Technology, U.S.A., all diluted at 1:1000). After washing with TBS containing 0.1% Triton X-100 (TBST) for 15 min, the nitrocellulose membranes were incubated with corresponding secondary antibodies for 1 h at room temperature. Finally, protein bands on the membranes were visualized using an eECL Western Blot Kit (CWBio, China) and analyzed using ImageJ software.
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3

Evaluating Chondrocyte Markers with LPP Treatment

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CSPCs were treated with different concentration of LPP for 7 days. Protein from the culture medium as well as cell lysates in each group was collected after preparation with lysis buffer (RIPA Lysis Buffer, Beyotime, China) on ice. Lysate proteins were separated with SDS-PAGE and transferred to PVDF membranes following the routine mentioned before [20 (link)]. Primary antibodies against SOX9 (Abcam, USA), collagen type II (Novus Biologicals, USA), aggrecan (Novus Biologicals, USA), or β-actin (Tianjin Sungene Biotech Co., China) were applied to blots labeling at 4°C overnight. The blots were then incubated with secondary antibodies (Boster Biological Technology Co. LTD., China) for 1 h. The bands were visualized by the enhanced chemiluminescence (ECL) procedure (Amersham Biosciences, Piscataway, NJ, USA) and integrated density was quantified using Image J software.
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4

Western Blot Analysis of Chondrocyte Proteins

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Cells were harvested and lysed on ice using 100 μL RIPA buffer (Thermo Fisher Scientific, CA, USA) containing Phenylmethylsulfonyl fluoride. After separation on 10% or 5% polyacrylamide gels, proteins were transferred to polyvinylidene difluoride (PVDF) membrane (Millipore, MA, USA). The membranes were blocked with 5% non-fat milk for 1 h at room temperature and then incubated with different primary antibodies (collagen II, aggrecan, and collagen X were from Novus, CO, USA; p38 MAPK was from Boster Biological Technology, CA, USA; p-p38 MAPK was from Santa Cruz, CA, USA; MMP-3, IL-1β, TNF-α, and NF-κB were from Abcam, CA, USA) overnight at 4 °C. The next day membranes were incubated with HRP-linked secondary antibodies (goat anti-rabbit and goat anti-mouse were from Beijing Zhongshan Jinqiao Biotechnology) for 1 h at room temperature. The protein signal was detected using an ECL chemiluminescence kit (Thermo Scientific CA, USA) according to the manufacturer’s instructions and observed using a gel image analyzer. The relative protein expression was compared to the control group. The phosphorylation level of p38 MAPK is given as the ratio of phosphorylated p38 MAPK to total p38 MAPK protein.
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5

Multimodal Analysis of SIS Biomaterials

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Normal SIS, D-SIS, recellularized SIS at 7, 14 and 28 days, and DD-SIS were washed with PBS three times, fixed in PFA (4%, 24 h), followed by standard paraffin embedding and sectioning. For in vivo treatment, the IVD were harvested from the rabbits three months after injection of DD-SIS, fixed in PFA (4%, 48 h), decalcified (30 days) and embedded in paraffin. Hematoxylin and eosin staining was performed to reveal the whole structure and cell distribution. Alcian blue staining was performed to evaluate retained GAG content. Specimens for immunohistochemistry were processed as previously described by our group. [47 (link)] Epitopes of interest included collagen type I (Abcam, Cambridge, MA, USA), collagen type II (Novus Biologicals, Littleton, CO, USA) and aggrecan (Novus Biologicals). 4,6-Diamidino-2-phenylindole (DAPI, Sigma) fluorescent nuclear staining was performed to evaluate the efficiency of decellularization and NPC distribution at different time points.
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6

Immunohistochemical Analysis of Cartilage Proteins

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The prepared tissue sections were processed through dewaxing, antigen retrieval, and inactivation of endogenous peroxidase. Then, they were incubated overnight at 4°C with primary antibodies (aggrecan: Novus, NB120-11570, diluted 1:200; collagen II: Abcam, ab34712, diluted 1:200) and corresponding HRP-conjugated secondary antibodies (goat antimouse IgG and goat antirabbit IgG, ZSGB-BIO, China, diluted 1:200) for 2 h at 37°C. After color development with diaminobenzidine (DAB), the sections were counterstained with Hematoxylin. The positive staining was observed under a light microscope (Olympus BX51) and quantitated using the ImagePro Plus software (version 5.1, Media Cybernetics, Inc.) to calculate the staining intensity.
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7

Molecular Analysis of NP Cell Responses

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After the indicated treatments, NP cells were washed twice with PBS and lysed in radioimmunoprecipitation assay (RIPA) lysis buffer (Beyotime) supplemented with phosphatase and protease inhibitors. The lysates were electrophoresed by 10–12% sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS–PAGE) and transferred onto polyvinylidene difluoride (PVDF) membranes (EMD Millipore, Billerica, MA, USA). Then, the membranes were blocked with NcmBlot blocking buffer (NCM Biotech, Jiangsu, China) for 20 min at room temperature and incubated overnight at 4 °C with primary antibodies against HSP70 (1:1000, ABclonal), Mfn1 (1:1500, Proteintech), Mfn2 (1:1500, Proteintech), OPA1 (1:1000, Proteintech), DRP1 (1:1000, Affinity Biosciences), MFF (1:1000, Proteintech), Fis1 (1:1000, Proteintech), cleaved caspase 3 (1:1000, Affinity Biosciences, OH, USA), caspase 9 (1:1000, Proteintech), Bcl-2 (1:1000, Abcam, Cambridge, MA, USA), Bax (1:1000, Proteintech), Collagen II (1:500, Affinity Biosciences), Aggrecan (1:500, NOVUS, USA), SIRT3 (1:1000, ABclonal), and β-actin (1:2000, Cell Signaling Technology, Danvers, MA, USA). Then, the PVDF membranes were washed with TBST and incubated with horseradish peroxidase-conjugated secondary antibodies for 1 h at room temperature. Signals were detected using an ECL kit (Affinity Biosciences).
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