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22 protocols using ab53212

1

Immunofluorescence Analysis of Anovel1 and Aquaporin-5 Expression in 5-Aza-CdR-Treated HSG Cells

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HSG cells were grown on cell culture slides and treated with 10 μM 5-Aza-CdR (Sigma Aldrich, St. Louis, MO, USA) for 3 days. After treatment with 5-Aza-CdR, the HSG cells were fixed in 4% paraformaldehyde for 10 min and washed with PBS. For Matrigel-encapsulated HSG cells (3-day culture), they were fixed in ice cold 4% paraformaldehyde for 30 min and washed with PBS. Cells were permeabilized with 0.1% Triton X-100 for 10 min. Cells were then blocked with 10% donkey serum and 3% BSA for 60 min and washed with cold PBS/Glycine. After that, cells were incubated overnight with an anti-human ANO1 (1:200, Abcam, ab53212, Cambridge, UK) or anti-human AQP5 primary (1:200, Alomone Labs, #AQP-005, Hadassah Ein Kerem, Jerusalem, Israel) antibody at 4°C. After washing with PBS, the cells were incubated with an Alexa Fluor®® 488 donkey anti-mouse or anti-rabbit IgG secondary antibody (1:200) and DAPI (1:1000) for 2 h at room temperature. HSG cells treated with or without 5-Aza-CdR were mounted with FLUO-GEL WITH TRIS BUFFER (Electron Microscopy Science, Hatfield, PA, USA) and visualized by an LSM700 (Carl Zeiss, Oberkochen, Germany).
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2

Immunohistochemical Analysis of ANO1 in Lung Cancers

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Surgically resected human cancer tissue samples consisting of 44 cases of lung adenocarcinoma and 40 cases of squamous cell lung carcinoma were obtained retrospectively from Peking University Third Hospital. The tissue samples were fully de-identified before access by us and all the patients were informed and consented for the use of their excised tissue for future research. The tissue sections were incubated in a 60°C dry chamber for an hour before de-paraffinized in xylene three times and hydrated through a graded series of ethanol. Treated in 3% hydrogen peroxide for 10 minutes, the tissues were then boiled in 10 mM citrate antigen retrieval solution (pH 6.0) for 20 minutes using a microwave oven. Immunohistochemical (IHC) staining was carried out by incubating the tissues with the primary antibody to ANO1 (1:100; ab53212, Abcam) at 4°C overnight. After incubating the tissues with goat anti-rabbit IgG-HRP for 30 minutes at 37°C, DAB chromogen system was used for visualization. Scores were calculated by multiplying the intensity (integer between 0 and 3).
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3

Antibody Characterization and Validation

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Rabbit anti-AQP5 (AffRaTM14) and guinea pig anti-AQP5 (AffGPTM41) were developed and characterized in our laboratory [29 (link), 28 (link)]. Rabbit anti-cleaved caspase-3 (Asp175) (9661; Cell Signaling, Beverly, MA, USA) [35 (link)], rabbit anti-Ki67 (ab16667; Abcam, Cambridge, MA, USA), rabbit anti-NKCC1 (ab59791; Abcam), and rabbit anti-TMEM16A (ab53212; Abcam) were purchased as indicated. Secondary antibodies used were HRP-conjugated goat anti-rabbit (P0448; DAKO, Glostrup, Denmark), Rhodamine Red-X-conjugated donkey anti-rabbit (711-295-152; Jackson ImmunoResearch, West Grove, PA, USA), Alexa 488-conjugated donkey anti-rabbit (A21206; Life Technologies), and Alexa 488-conjugated donkey anti-guinea pig antibodies, which were made by conjugating Alexa 488 to donkey anti-guinea pig IgG (706-005-148; Jackson ImmunoResearch) by our laboratory using Alexa 488 protein labeling kit (A10235; Life Technologies). The specificities of commercial antibodies against cleaved caspase-3, Ki67, TMEM16A, and NKCC1 were confirmed by immunoblotting and immunofluorescence as described below.
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4

Western Blot Analysis of ANO1 and ANO2

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The thalamus and kidney from BALB/c mice, as well as ANO2-EGFP-transfected and untransfected NIH/3T3 cells, were lysed in RIPA buffer (Tris-base, 6.5 mM; NaCl, 15 mM; EDTA, 1 mM; NP-40, 1%; and Na-deoxycholate, 0.25%) with 1 mM phenylmethyl sulphonyl fluoride, Na3VO4, NaF and protease cocktail. Lysates were centrifuged at 13,000 r.p.m. for 10 min at 4 °C, and the supernatants were isolated for SDS–PAGE. From each sample, 50 μg of protein was resolved on 8% polyacrylamide gels and subsequently electroblotted to polyvinylidene fluoride (Bio-Rad, USA) membranes. Blots were incubated with primary antibodies overnight at 4 °C, followed by incubation with horseradish peroxidase (HRP)-linked secondary antibodies. Signals were visualized using ECL Plus reagent (Thermo Scientific, USA). The following antibodies were used: rabbit anti-ANO1 (ab53212, 1:500, Abcam, UK), rabbit anti-ANO2 (1:500 (ref. 35 (link))), mouse anti-β-actin (sc-47778, 1:2,000, Santa Cruz, USA), goat anti-rabbit-HRP-conjugated (31460, 1:5,000, Pierce, USA) and goat anti-mouse-HRP-conjugated (31430, 1:5,000, Pierce).
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5

Immunofluorescence Analysis of Autophagy in Aortic Smooth Muscle Cells

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The thoracic aortas were isolated and embedded in optimal cutting temperature compound (Sakura, Japan) for sectioning at an 8-um thickness. Frozen slides were incubated overnight at 4ºC with antibodies against LC3B (NB100-2220; 1:100; Novus Biologicals, CO, USA) and alpha-smooth muscle actin (α-SMA) (BM0002; 1:100; Boster Biological Technology) and then treated with FITC-labeled anti-rabbit IgG (31635; 1:100) and Cy3-labeled anti-mouse IgG (A10521; 1:100) secondary antibodies (Invitrogen, CA, USA). Nuclei were counterstained with 4′,6-diamidino-2-phenylindole (DAPI). MASMCs were infected with the mRFP-GFP-LC3 adenovirus for 48 h. The puncta in thoracic aortas and MASMCs were viewed under a confocal microscope (Zeiss LSM800, Carl Zeiss, Munich, Germany) with z-stacks and 63× objective lens. The number of puncta was analyzed using the ImageJ program. For endogenous colocalization studies, MASMCs were incubated with TMEM16A (ab53212; 1:50), VPS34 (ab124905; 1:50) (Abcam), p62 (sc-48402; 1:100), Beclin-1 (sc-48341; 1:1000) (Santa Cruz Biotechnology), and Bcl-2 (BM4985; 1:100) (Boster Biological Technology) antibodies, and processed for colocalization observation with a confocal microscope.
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6

Western Blot Analysis of TMEM16A Protein

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Proteins from the cell lysates were prepared from cell lines as previously described [16 (link)]. Equal amounts of protein were denatured and separated by SDS-PAGE, transferred onto PVDF membranes, and incubated with polyclonal antibodies to TMEM16A (Abcam, ab53212; 1:100) and mouse β-actin antibody (Cell Signalling; 1:500). The peak intensity of each band was visualized using an Enhanced Chemiluminescence kit (Amersham, Little Chalfont, UK) on X-ray film (Millipore Corporation, Billerica, USA).
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7

Western Blot Analysis of TMEM16A

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Cells were washed twice with ice-cold phosphate-buffered saline (PBS) and dissolved in lysis buffer (150 mM NaCl, 20 mM Tris, 5 mM EDTA, pH 7.5, 1% Triton X-100 and supplemented with 1 mM PMSF). After protein quantification, samples containing 100 µg proteins were denatured and electrophoresed using 10% SDS-PAGE and then transferred onto PVDF membranes. After blocking with 5% (w/v) nonfat milk and washing with Tris-buffered saline–Tween solution (TBST), the membranes were incubated overnight at 4°C with primary anti-TMEM16A polyclonal antibody (Abcam, ab53212; 1∶100) and mouse anti-β-actin antibody (Cell Signaling; 1∶500), respectively. All other primary antibodies were purchased from Cell Signaling Technology. After washing, the blots were incubated with secondary antibody conjugated to horseradish peroxidase (Sigma; 1∶5,000) for 1 h at room temperature and visualized using an enhanced chemiluminescence kit (Amersham, Little Chalfont, UK) on X-ray film (Millipore Corporation, Billerica, USA).
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8

Temporal Expression of Membrane Proteins

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The SG tissue were harvested at CT0, 6, 12, 18, 24, 30, 36, 42 and 48, and homogenized in ice cold radioimmunoprecipitation assay (RIPA) lysis buffer (188–02453, Fujifilm-wako Corp., Osaka, Japan). Protein samples concentration were calculated using the DC protein assay kit (Bio-Rad, Richmond, CA) based on the Lowry method. For each sample, 10 μg protein was electrophoresed on 10% SDS-PAGE gel, transferred to Immobilon-P Transfer Membrane (PVDF, Millipore, Burlington, Massachusetts, USA) membrane and analyzed using the Mini Trans-Blot® Transfer Cell (#1703930JA, Bio-Rad, Richmond, CA). PVDF membrane were blocked with 5% skimmed milk for 1h, and probed overnight at 4 °C with anti-ANO1 (1:500, ab53212; Abcam, Cambridge, UK), anti-Aquaporin 5 (1:5000, ab78486; Abcam, Cambridge, UK) and anti-β ACTIN (1:10000, GTX110564; GeneTex, Alton Pkwy, US). Horse-radish peroxidase (HRP)-conjugated polyclonal goat anti-rabbit immunoglobulins (1:1000, P0448; Dako, California, US) was used for 1 h at room temperature. Protein bands were visualized with the ECL chemiluminescence WB Detection Reagents (GE Health Care, Little Chalfont, UK), and documented using the Image Quant LAS-4000 (GE Health Care). Quantification of bands were performed by using Image Quant TL 7.0 software (GE Health Care).
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9

Western Blot Analysis of Protein Markers

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Cell lysates were prepared using Triton X-100 lysis buffer (150 mM NaCl, 20 mM Tris, 1% Triton X-100, 1% sodium deoxycholate, 0.1% SDS, 10 mM EDTA) containing cocktail protease inhibitor (Roche Applied Science). Protein samples were denatured at 95°C for 5 minutes, separated by SDS-PAGE and then transferred to PVDF membranes (Millipore). After blocking with 5% milk for 1 hour, the membranes were incubated with primary antibodies against ANO1 (1:1000; ab53212, Abcam), Caspase-7 (1:1000; 12742, Cell Signaling Technology), CDK2 (1:500; sc-6248, Santa Cruz), Cyclin D1 (1:1000; 2978, Cell Signaling Technology) or actin (1:2000; TA-09, Zhongshan golden bridge) overnight at 4°C. After extensive washing in TBS buffer, the membranes were incubated with horseradish peroxidase-conjugated secondary antibody for 1 hour at room temperature. The signal was detected using an ECL Western blotting detection system (Millipore).
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10

Immunohistochemical Localization of TMEM16A and c-Kit

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Anal tissues were isolated, and the skeletal muscle fibers were removed, immediately followed by embedded in Optimal cutting temperature compound (Bio-Tek). Cryosections with a 10-μm thickness were fixed in pre-cooled acetone for 10 min and washed with PBS three times at room temperature. The nonspecific binding of primary antibodies was blocked by incubation with PBST (0.3% Triton in PBS) containing 1% BSA for 1 h. Incubation was carried out overnight at 4°C with a rabbit polyclonal antibody to TMEM16A (ab53212, 1:100; Abcam) and a goat polyclonal antibody against c-Kit (AF332, 1:20; R&D systems). The specificity of these antibodies has been established by vendors and others. After washing in PBS, cells were incubated with an Alexa Fluor 488-conjugated donkey anti-Rabbit IgG H&L (ab150061, 1:500; Abcam) or an Alexa Fluor 594-conjugated rabbit anti-goat IgG (H+L) (A27016, 1:500; Life tech) for 1 h. Negative controls were performed by omitting the primary antibodies. Immunoreactivity was evaluated using a Leica TCS SP5 confocal laser scanning microscope system (Leica Microsystems Inc., Buffalo Grove, IL).
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