The largest database of trusted experimental protocols

17 protocols using cm120

1

Sciatic Nerve Regeneration Assessment

Check if the same lab product or an alternative is used in the 5 most similar protocols
At 8 weeks after surgery, a segment of sciatic nerve comprising the tissue 1 mm away from the proximal and distal anastomotic stoma of CEANA was resected (mainly to observe whether regenerated axons passed through the anastomotic scar), fixed with 10% formaldehyde, embedded with paraffin, and successively sliced into sections (each section spanning the area 2 mm away from the proximal and distal anastomotic stoma). The transverse sections were routinely stained with hematoxylin-eosin, cut into semi-thin sections, stained with toluidine blue and observed under the optical microscope (Olympus, Tokyo, Japan). A 3 mm-long sciatic nerve segment was cut 3 mm away from distal anastomotic stoma of the sciatic nerve on the surgical side. An identical sciatic nerve segment from the control side was cut as a normal control. The specimen was rinsed, fixed with glutaraldehyde, embedded with epon 812, sliced into ultrathin cross-sections, counterstained with uranium-lead and observed under transmission electron microscope (CM120, Oxoid, Basingstoke, UK). Using the Image-Pro Plus image analysis system (Media Cybernetics, Bethesda, MD, USA), the total number of myelinated nerve fibers was counted and the thickness of myelin sheath was measured.
+ Open protocol
+ Expand
2

Triceps Surae Wet Weight and Sciatic Nerve Regeneration

Check if the same lab product or an alternative is used in the 5 most similar protocols
At 8 weeks after repair, the bilateral triceps surae were harvested and weighed using an electronic balance (type HZT A1000, Shanghai Jia Zhan Instrumentation Equipment, Shanghai, China) after surface blood clot was removed using gauze. Weight was calculated using the following formula: triceps wet weight recovery rate = (triceps wet weight at surgical side/triceps wet weight at control side) × 100%. A 7-mm sciatic nerve was cut at the inferior border of the piriformis muscle of the operated side, 3 mm lateral to the distal anastomosis. The specimen was rinsed, fixed with glutaraldehyde, and embedded using epoxy 812. Then the specimen was sliced into ultrathin cross-sections and counterstained with uranium-lead. Nerve regeneration was observed under transmission electron microscopy (CM120, Oxoid, Wade, UK). The myelin sheath thickness was measured using Image Pro Plus 5.0 system (Bethesda, Maryland, USA). Semithin sections of sciatic nerve specimens were stained with toluidine blue and observed under transmission electron microscopy (JEM-1200EX, Japanese Electronics Company, Tokyo, Japan), to calculate the total number of myelinated nerve fibers and the myelin thickness.
+ Open protocol
+ Expand
3

Negative Staining Transmission Electron Microscopy

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples (3.5 μl) were applied on carbon-coated and glow-discharged 300 mesh copper grids (SPI) and adsorbed for 1 min. The samples were then washed in two drops of 50 μl deionized water and stained with 50 μl of 1.5% uranyl acetate for 30 s. Negatively stained samples were visualized by TEM: JEOL 1230 operating at 80 kV and Philips CM120 or FEI Talos L120 operating at 120 kV. Digital images were recorded with Gatan Orios 4k-pixel CCD camera and Digital Micrograph software, Olympus CCD SIS Cantega G2 2k-pixel CCD camera using iTEM software, or FEI Ceta 16k-pixel CMOS camera and TIA software. Image brightness and contrast were adjusted using Adobe Photoshop CC software.
+ Open protocol
+ Expand
4

Hfq Peptide Filament Imaging via TEM

Check if the same lab product or an alternative is used in the 5 most similar protocols
One droplet of Hfq peptide filaments was applied to glow-discharged 300 mesh carbon-coated copper grids for 1 min, washed with water, stained with 2% uranyl acetate (w/v) for 1 min, and dried under dark conditions. Samples were observed using a FEI CM120 transmission electron microscope at an accelerating voltage of 120 kV under TEM low-dose mode. TEM images were recorded using a Gatan USC1000 2k × 2k camera.
+ Open protocol
+ Expand
5

Transmission Electron Microscopy Sample Preparation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples were prepared by spotting 5 µL of a 10 µM solution on to 300-mesh carbon-coated formvar copper grids (Ted Pella, Inc., Redding, CA) for 20 min at 22°C, after which excess solution was wicked away with Whatman qualitative filter paper, grade 2 (Sigma-Aldrich, St. Louis, MO). The grid then was incubated with 5 µL of 2.5% (v/v) glutaraldehyde in water for 5 min and the solution wicked away as before. Staining was done with 5 µL of 1% (w/v) uranyl acetate in water for 3 min. The stain was wicked off and the grid was air-dried. Images were obtained using a Philips CM120 (FEI) transmission electron microscope equipped with a tungsten filament, operating at an accelerating voltage of 120 kV.
+ Open protocol
+ Expand
6

Characterization and Degradation of Hollow Nanoparticles

Check if the same lab product or an alternative is used in the 5 most similar protocols
Size and Zeta (ζ) potentials were measured using a Nano-ZS90 Zetasizer equipment (Malvern, Westborough, MA, USA). Transmission electron microscopy (TEM, UC Davis School of Medicine, FEI CM120, Hillsboro, OR, USA) was used to investigate the nanoparticles structure and morphological aspect. First, a 7 μL droplet of MilliQ water containing suspended nanoparticles were placed in discharged TEM grids for 10 min. Then, samples were stained with uranyl acetate, dried, and imaged at room temperature. Confirmation of nanoparticle degradation was performed using hollow nanoparticles labeled with 1 mol% rhodamine B isothiocyanate. Degradation studies were performed in PBS pH 7.4 and PBS pH 3.5. The absorbance of the hollow nanoparticles dispersed at a final concentration of 1 mg/mL was monitored over a period of 7 days using a Spectramax M5 plate reader (Molecular Devices, Sunnyvale, CA, USA) at 544 nm.
+ Open protocol
+ Expand
7

Cryo-TEM Imaging of Nanoparticle Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples were prepared to be at a mass percentage of 1% particles in PBS and the Cryo-TEM specimens were prepared in a controlled environment vitrification system (CEVS). Cryogenic transmission electron microscopy (cryo-TEM) imaging was performed either by a Phillips CM120 or a FEI Talos 200 C, FEG-equipped cryo-dedicated high-resolution transmission electron microscope (TEM and STEM), operated at an accelerating voltage of 120 kV. Specimens were transferred into an Oxford CT-3500 cryo-holder (Philips) or a Gatan 626DH (FEI) cryo-holder, and equilibrated below −178 °C. Specimens were examined using a low-dose imaging procedure to minimize electron-beam radiation damage. Images were recorded digitally by a Gatan Multiscan 791 cooled CCD camera (Philips CM 120), or a Gatan US 1000 high-resolution CCD camera (Tecnai T12 G2), using DigitalMicrograph software.
+ Open protocol
+ Expand
8

Cryo-TEM Imaging of Proteorhodopsin

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cryo-TEM was performed as described earlier (Rhiel et al. 2013 (link)). Briefly, a small droplet (5 μl) of the proteorhodopsin fraction, i.e., band B3 was placed on a copper grid covered by a holey carbon film (Quantifoil R 1.2/1.3, pore size 1.2 μm, 400 mesh; Quantifoil Micro Tools, Jena, Germany). Excess liquid was blotted for 3 s between two strips of filter paper. Subsequently, the sample was rapidly plunged into liquid ethane (cooled to about − 180 °C with liquid nitrogen) in a Cryobox (Zeiss, Oberkochen, Germany). The frozen specimen was transferred with a cryo-holder (Gatan 626-DH, Gatan, Pleasanton, USA) into a precooled cryo-transmission electron microscope (CM 120, FEI, Eindhoven, Netherlands) operated at 120 kV and viewed under low dose conditions. Cryo-TEM images were recorded with a 2 K CMOS Camera (F216, software EMMENU V4.0; camera and software TVIPS, Munich, Germany).
+ Open protocol
+ Expand
9

Ultrastructural Characterization of Nanoparticles

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were fixed using 1.6% (v/v) glutaraldehyde in phosphate buffer 0.1 M at pH 7.4 overnight at 4°C. They were postfixed using 1% (v/v) osmium tetroxide for 90 minutes and dehydrated in ascending series of ethanol dilutions. They were then treated with propylene oxide, impregnated in ascending dilutions of resin in propylene oxide, left in pure resin overnight (Epon; Inland Europe), embedded, and polymerized at 60°C for 48 hours. Ultrathin sections (70 nm) performed on an ultramicrotome (RMC, powertome PC) were collected on butvar-coated single-slot copper grids and were stained with 2% (v/v) uranyl acetate for 30 minutes and with lead citrate for 2 minutes. For NP characterization, solution at 40 μg/mL was deposited on a carbon-coated grid previously submitted to a glow discharge (Elmo, Cordouan Technologies). Grids were examined by transmission electron microscopy (TEM; CM120; FEI), and the images were acquired using a digital 2×2 k Gatan camera.
+ Open protocol
+ Expand
10

Quantifying Nanoparticle Uptake in Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were seeded (3 × 104 cells per glass bottom gridded dish, MatTek Corporation) in 2 mL of the appropriate growth medium and were grown for one day to reach 40% confluence. MPIO (0.3 mM Fe) or ScreenMAG (3.2 mM Fe) were incubated on cells using complete medium or free-serum medium, respectively (see Supplementary Data S5A for more explanation). After 4 h of incubation, cells were washed with PBS and fixed with 4% PFA in PBS for 2 h at room temperature. Cells were observed in fluorescence microscopy using a Leica DMI6000B microscope equipped with a CCD camera. After washes in milliQ water, cells were post-fixed using 1% (v/v) osmium tetroxide in PBS for 1 h. Cells were embedded in Epon for ultramicrotomy. Ultrathin sections were stained with 2% uranyl acetate and lead citrate before examination using a 120 kV CM120 (FEI) transmission electron microscope.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!