The largest database of trusted experimental protocols

5 protocols using glutamine synthetase

1

Immunostaining of Mouse Retinal Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Transduced mouse retinas were dissected and fixed in 4% paraformaldehyde for 30 min at room temperature. The retinas were incubated in PBS with 1% Triton X-100, 0.5% Tween 20 for 1 h at room temperature and in 10% normal goat serum for 1 h at room temperature and then incubated overnight at 4 °C with primary antibody: Brn3a (1:100; Santa Cruz Biotechnology, Santa Cruz, CA, USA), rhodopsin (1:500; Abcam, Cambridge, UK), PKCα (1:500; Abcam), calbindin (1:500; Abcam) and glutamine synthetase (GS) (1:500; Abcam) in blocking buffer. Secondary anti-rabbit IgG and anti-mouse IgG conjugated with Alexa TM594 and Alexa TM555, respectively (1:1,000; Molecular Probes), were applied for 1 h at room temperature. The retinas then were flat-mounted and the sections mounted on slide glass.
+ Open protocol
+ Expand
2

Fluorescent Immunohistochemistry for Cell Identification

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fluorescent immunohistochemistry was performed on cryostat sections using the method as described previously [23 (link)]. Primary mouse monoclonal, rat monoclonal or rabbit polyclonal antibodies raised against calbindin (Swant, Marly, Switzerland; 1:1000), CD68 (Serotec, Raleigh, NC; 1:500), glial fibrillary acidic protein (GFAP; DAKO, Carpinteria, CA; 1:300), glutamine synthetase (Abcam, Cambridge, MA; 1:1000), alpha subunit of G protein (Goα; Millipore, Billerica, MA; 1:1000), hexaribonucleotide binding protein-3 (NeuN; Millipore; 1:100), Neurofilament (SMI32; Covance, Munich, Germany; 1:1000), Npc1 (Abcam; 1:300), alpha isoform of protein kinase C (PKCα; Sigma; 1:1000), tyrosine hydroxylase (Millipore; 1:1000), and a microglia marker (F4/80; 1:200) were used. All primary antibodies are specific to determine their target proteins, which were used as specific markers to identify different types or structures of cells. Alexa 488-labeled (Molecular Probes, Eugene, USA) or Cy3-labeled (Dianova, Hamburg, Germany) secondary antibodies against mouse, rat or rabbit IgG were used. Fluorescence in sections was detected by a confocal microscope (Zeiss LSM780; Jena, Germany). Digital images were adjusted in contrast and brightness with the Photoshop software (Adobe Systems, San Jose, USA).
+ Open protocol
+ Expand
3

Metabolic Profiling of Heart Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Snap-frozen heart samples were homogenized and lysed in a buffer containing 25 mM Tris·HCl, 150 mM NaCl, 2 mM EGTA, 5 mM EDTA, 0.5% NP-40, and a protease and phosphatase inhibitor cocktail (Sigma-Aldrich). Protein concentration was determined using the Bradford reagent (Sigma-Aldrich). Tissue homogenates were separated by SDS-PAGE and transferred to nitrocellulose membranes followed by Western blot analysis. Antibodies used were as follows: glucose transporters 1 and 4 (GLUT1 and GLUT4; Abcam), LDHA (Proteintech), hexokinase 1 (Abcam), PDK4 (Abcam), pyruvate dehydrogenase E1α (PDH-E1α; Abcam), phospho-PDH-E1α (S293, p-PDH-E1α; Abcam), pyruvate carboxylase (Santa Cruz), glutamine synthetase (Abcam), glutaminase (Abcam), O-linked β-N-acetylglucosamine (GlcNac RL2; Abcam), glutamine fructose amidotransferase-2 (GFAT2; Abcam), and GAPDH (Sigma-Aldrich).
+ Open protocol
+ Expand
4

Protein Quantification and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed for 5 min at RT in a buffer composed of 150 mM NaCl, 50 mM Tris (pH 8.0), 5 mM EDTA, 1% (v/v) Nonidet p-40, 1 mM phenylmethylsulfonyl fluoride, 20 μg/mL aprotinin, and 25 μg/mL leupeptin (Sigma). The total protein concentration of lysates was measured using the Bio-Rad protein assay (Bio-Rad, Hercules, CA). Cell lysate (100 μg) was electrophoresed on a 12% polyacrylamide gel and the proteins were transferred to an Immobilon-P PVDF membrane (Millipore, Bedford, MA), which was then blocked for 2 h at RT in PBS containing 0.05% Tween 20 and 10% nonfat milk. The membrane was then incubated with antibodies against GAPDH (Sigma), HIF-1alpha, LC3 (Novus Biologicals Inc., Littleton, CO), c-MYC, SQSTM1/p62, PARP, phospho-mTOR, phospho-Akt (Ser 473), phospho-p70S6K, GRP78, phospo-ERK1/2, phospho-PERK, CHOP antibody, (Cell Signaling Technology, Beverly, CA), Glutamine synthetase (GS) (Abcam Inc., Cambridge, MA, USA) for 2 h at RT in PBS containing 0.05% Tween 20 and 5% nonfat milk, followed by incubation for 1 h at RT with horseradish peroxidase-conjugated secondary antibodies (Jackson ImmunoResearch Laboratories, West Grove, PA) in the same buffer. Blots were developed using a chemiluminescent detection system (ECL; GE Life Science, Buckinghamshire, UK).
+ Open protocol
+ Expand
5

Immunofluorescent Analysis of Retinal Cell Types

Check if the same lab product or an alternative is used in the 5 most similar protocols
The printed bioink containing the MIO-M1 cells was fixed with 4% PFA for 30 min at room temperature, followed by permeabilization with 0.1% Triton-X for 7 min. The samples were blocked with 10% normal goat serum (Vector Laboratory, San Francisco, CA, USA) for 1 h and incubated with a 1:100 dilution of blue opsin (Millipore, Burlington, MA, USA), red-green opsin (Millipore), rhodopsin (Abcam), glial fibrillary acidic protein (GFAP; Abcam), and glutamine synthetase (GS, Abcam) antibodies overnight at 4 °C (Table S1). After washing with PBS containing Tween-20 (PBST) three times, the samples were incubated with a 1:1000 dilution of secondary antibody conjugated with Alexa Fluor 488 or 594 (Invitrogen, Carlsbad, CA, USA). Then, the samples were washed with PBST three times and co-stained with DAPI for visualizing the nuclei. The fluorescence signal was observed under a fluorescence microscope (Zeiss).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!