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4 protocols using anti phospho ampka thr172

1

Western Blot Analysis of Phospho-AMPK in Yeast

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Yeast cells were grown for 48 h in YPD liquid medium and, then, inoculated in fresh YPD (initial O.D.600nm 0.25). Flasks were incubated under shaking (200 rpm) at 30°C and growth was followed till O.D.600nm ~1.0 (after 5 h). Culture samples were collected and total protein homogenates were prepared according to Yaffe and Schatz method [46 (link)] with minor modifications. NaOH and β-mercaptoethanol were added to a final concentration of 0.2 M and 1%, respectively. Tubes were incubated on ice for 2 minutes and, then, trichloroacetic acid was added to a final concentration of 6%. After incubation on ice for 10 minutes, tubes were centrifuged at maximum speed for 5 minutes. Supernatant was discarded and pellets were stored at -20°C until use or promptly resusspended in Laemlli sample buffer to obtain a 10-O.D. suspension. Proteins were separated by electrophoresis (SDS-PAGE, 10% SDS-polyacrylamide gel, 100 V, 2 hours) and electrotransferred to Immobilon-P for 20 min at 18 V in 25 mM Tris, 192 mM glycine and 10% methanol, using a trans-blot semi-dry cell (BioRad). Membranes were treated with anti-phospho-AMPKa Thr172 (Cell Signaling) or anti-HA (Sigma) antibodies. Blots were detected using the chemiluminescence ECL Plus kit (GE Healthcare).
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2

Immunostaining of Phospho-AMPK in Oocytes

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Oocytes were denuded from the granulosa cells 8 or 20 h after CCCP treatment and immunostained as described previously (Takeo et al. 2013) (link). Rabbit polyclonal anti-phospho-AMPKa (Thr172) (1:1000; Cell Signaling Technology, Inc., Beverly, MA, USA) was used as a primary antibody and goat anti-rabbit IgG FITC-conjugate was used as a secondary antibody (1:1000; Millipore, Tokyo, Japan). The oocytes were mounted onto glass slides with antifade reagent containing DAPI. The fluorescence intensity of p-AMPK in oocytes was observed using a digital fluorescence microscope (BZ-8000; Keyence) and quantified using ImageJ Software (NIH, Bethesda, MD, USA).
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3

Antibody Validation and Dilution Protocol

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Antibodies were purchased as follows and used at the indicated dilutions: anti-GFP (Roche, 11814460001, 1:2500), anti-MYC (Roche, 11667149001, 1:2500), anti-HA (Abmart, M20003L, 1:2500), anti-FLAG (Sigma, F1804, 1:2500), anti-phospho-AMPKa (Thr172) (Cell Signaling Technology, 2535S, 1:1000), anti-Phospho-(Ser/Thr) AMPK Substrate (Cell Signaling Technology, 5759S, 1: 1000), anti-PGK1 (Nordic Immunology, NE130/7S, 1:10000), anti-Dpm1 (Invitrogen, A6429, 1:2000), anti-ALP (Invitrogen, A6458, 1:2000), anti-Pep12 (Invitrogen, A21273, 1:2000), anti-Porin (Invitrogen, A6449, 1:20000), anti-Histone H4 (Abcam, Ab10158, 1:2500), anti-LC3 (MBL, PM036, 1:1000), anti-ATR (Santa Cruz, SC-1887, 1:250), anti-Actin (Abmart, P30002, 1:5000). Goat Anti-Mouse IgG1, Human ads-HRP (SouthernBiotech, 1070-05, 1:10000) and Goat Anti-Rabbit IgG, Human ads-HRP (SouthernBiotech, 4010-05, 1:10000).
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4

Protein Expression Analysis by Western Blot

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Cells were suspended in RIPA buffer containing a cocktail of protease inhibitors (Roche, USA). Determination of protein concentrations was done by a BCA assay (Keygen, China). Equal amounts of 5 µg protein were separated by 8% or 10% SDS-PAGE and electrophoretically transferred onto polyvinylidene fluoride (PVDF) membranes (Millipore, Bedford, MA, USA). After blocking with 5% nonfat milk or 5% BSA dissolved in tris-buffered saline containing 0.1% Tween-20, the membrane was incubated with the indicated antibodies at 4°C overnight. Anti-collagen I, Anti-Fibronectin, Anti-SLC22A1 were all from Abcam company (Cambridge, MA, USA). Anti-phospho-AMPKa (Thr172) (Cell Signaling Technology, USA). The membranes were incubated with an appropriate HRP conjugated secondary antibody at room temperature for 1 hour.
Proteins were detected using an enhanced chemiluminescence reagent (Millipore, USA) and imaged by an Alpha Innotech Flour Chem-FC2 imaging system (Alpha Innotech, San Leanardo, CA). ImageJ (National Institutes of Health, USA) was used to quantify immunoblots.
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