purified IgG from 300 patients to apoptotic Jurkat cells. Jurkat cells were exposed to UV
light (240×10−3 J) to induce apoptosis using a UV stratalinker
2400 (Stratagene, Santa Clara, CA). Then 1×106 apoptotic Jurkat cells
were incubated for 30 minutes at 37°C with 80μl cell culture supernatants or
60μl purified IgG samples further diluted 1:2 in PBS (final dilution 1:20). After
two washes in 3ml PBS at 4°C, samples were incubated with FITC-conjugated anti-IgM
or anti-IgG F(ab’)2 secondary antibodies, respectively (Invitrogen, Camarillo, CA)
for 30 minutes at 4°C. After two additional washes in 3ml PBS at 4°C, cells
were acquired using an Accuri C6 flow cytometer (BD Biosciences, San Jose, CA) after
gating on apoptotic cells. To avoid inter-experiment variations, all samples were assessed
at the same time in the same experiment using the same instrument settings. Results are
reported as log2 values of the mean fluorescence intensity (MFI) of positive
cells.