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11 protocols using pe conjugated anti il 17a

1

Regulatory and Pro-inflammatory T-cell Quantification

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The normal healthy controls were age-matched or relatives without detectable mutations in each allele. Briefly, 1 × 106 PBMCs were surface labeled with peridinin chlorophyll protein (PerCP)-conjugated anti-CD4 (SK3, BD Biosciences, San Jose, CA) and fluorescein isothiocyanate (FITC)-conjugated anti-CD25 (2A3, BD Biosciences). The Treg cells were gated from CD4+CD25 high cells and quantified using intra-cellularly labeled phycoerythrin (PE)-conjugated anti-FOXP3 (PCH101; biosciences, San Diego, CA) (37 (link)).
Th17 cells were counted by intracellular staining of CD4+ T cells for IL-17 production after 4 h of stimulation with 50 ng/ml phorbol 12-myristate 13-acetate (PMA) and 1 μg/ml ionomycin (Sigma-Aldrich, St. Louis, MO) in the presence of 1 μl/ml GolgiStop (Becton Dickinson, Franklin Lakes, NJ) (38 (link)). After surface staining with PerCP -conjugated anti-CD4, PBMCs were fixed, permeabilized (Cytofix/Cytoperm; Pharmingen), and stained with PE-conjugated anti-IL17A (eBioscience, San Diego, LA) as previously reported (30 (link)).
Data were analyzed using CellQuest™ analysis software (BD Biosciences). The proportion of Treg cells was determined based on CD4+CD25+FOXP3+ and Th17 cells on CD4+IL17+ after non- and stimulation, respectively.
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2

Intracellular Cytokine Profiling of Lymph Nodes

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Submandibular lymph nodes were consistently swollen at day 7 among mice with ears treated with IMQ. Lymph node samples were minced through a 40-μm nylon mesh (Cell Strainer, BD Biosciences, Franklin Lakes, NJ, USA) to obtain single-cell suspensions. Cells were rested in RPMI supplemented with 10% fetal calf serum overnight, and 2 × 106 cells/200 μl were stimulated with 50 ng/ml phorbol 12-myristate 13-acetate and 2 μg/ml ionomycin (Sigma-Aldrich, St. Louis, MO, USA) together with monensin (BioLegend, San Diego, CA, USA) for 6 h. Cells were stained with anti-CD3ε followed by intracellular staining using monoclonal antibodies (mAbs) PE-conjugated anti–IL-17A or anti–IL-22 (eBioscience, San Diego, CA, USA) after fixation and permeabilization with FIX & PERM reagent (Life Technologies). Samples were acquired on a FACSCalibur (BD Biosciences) and analyzed using FlowJo software (TreeStar Inc., Ashland, OR, USA).
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3

Intracellular Cytokine Staining Protocol

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For intracellular cytokine staining, the cells were restimulated for 4 h with 50 ng/mL phorbol-12-myristate-13-acetate (PMA) (Sigma-Aldrich, Saint Louis, MO, USA) and 500 ng/mL ionomycin (Sigma-Aldrich) in the presence of Brefeldin A (eBioscience, San Diego, CA, USA), as recommended by the manufacturer. The cells were first stained with APC-eFluor780 conjugated anti-CD4 antibody (Ab), then permeabilized with Perm/Fix solution (eBioscience), and finally stained with PE conjugated anti-IL-17A, eFluor450 conjugated anti-IFN-γ and PE-Cy5 conjugated anti-Foxp3 Abs (eBioscience). Data were acquired using a MACSQuant Analyzer 10 (Miltenyi Biotec). Isotype-matched Abs (directly conjugated) were used as controls.
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4

Multiparametric Flow Cytometry Analysis

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The following Abs and isotype controls were purchased from e-Biosciences: PE-conjugated anti–IFN-γ and rat IgG2a; PE-conjugated anti–IL-5; PECy5-labeled anti-CD4; anti-CD80 (16-10A1) and anti-CD83 (Michel-17); rat IgG1, IgG2a, and IgG2b; PE-conjugated anti-CD11c (N418); hamster IgG; PE-conjugated anti–IL-17A (eBio17B7); and rat IgG2a. For intracellular staining, cell suspensions from cervical lymph nodes (cLNs) were stimulated with anti-CD3 and anti-CD28 Abs (eBioscience) for 48 h, followed by PMA (50 ng/ml), ionomycin (1 µg/ml), and brefeldin A (10 µg/ml) for 6 h. Cells were washed, incubated with FcR block (1 µg/ml; eBiosciences), and stained for CD4. Cells were fixed with 2% paraformaldehyde, permeabilized with 0.1% saponin (Sigma), and stained for IL-5, IL-17 and IFN-γ. Cells were analyzed on a FACS Calibur (BD Biosciences) with FCS Express software (DeNovo Software).
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5

Flow Cytometry of Splenic Immune Cells

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The treated spleen cells (1×10^6cells) were stained with anti-P2X7 receptor (extracellular)-FITC antibody (Alomone, Jerusalem, Israel) and CD68 antibody (NOVUS, Littleton, USA), and the white cell suspension obtained from the spleen was stained with FITC conjugated mouse anti-rat CD4, PE conjugated mouse anti-rat CD25 (BD Bioscience, MD, USA), PE conjugated anti-IL-17A and APC conjugated anti-Foxp3 antibodies (eBioscience, San Jose, CA, USA). Data was acquired by a Calibur (BD BioSciences) flow cytometer and data analysis was performed using Flow Jo software version 7.6 (Tree Star, Ashland, OR, USA).
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6

Halofuginone and BLZ945 Protocol

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Pure halofuginone (CAS No. 55837-20-2) was purchased from Sigma-Aldrich (St. Louis, MO, USA). BLZ945 (CAS# 953769-46-5) was purchased from APExBIO (Boston, MA, USA). Phospho-Smad2 (Ser465/467) (138D4), Smad2 (D43B4), phospho-Smad3 (Ser423/425) (C25A9) and Smad3 (C67H9) Rabbit mAb were purchased from Cell signaling technology (Danvers, MA, USA). PB-conjugated anti-CD4; PE-conjugated anti-IL-17a and PerCP5.5-conjugated anti-CD45; APC-conjugated anti-CD11b were purchased from Ebioscience (San Diego, CA, USA).
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7

Flow Cytometry of Intestinal Neutrophils

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Flow cytometry analysis of neutrophils in the small intestine and colon was performed using our previous protocol [42 (link)]. In brief, at the end of each experiment, the mouse intestine was isolated, cleaned from fat and connective tissues, washed thoroughly with PBS to remove all content, opened longitudinally, cut into 0.5 cm pieces (the parts with Peyer’s patches were excluded) and shaken at 220 rpm in 25 mL EDTA solution for 30 min at 37 °C. Samples were centrifuged at 1500× g, and the supernatant was discarded; this process was repeated twice. The tissues were then washed with harvest medium consisting of RPMI 1640, heat-inactivated fetal bovine serum, HGPG (HEPES, L-glutamine, penicillin/streptomycin, and gentamycin) for 5 min before incubation with collagenase (100 U/mL) for 45 min at 37 °C on the shaker followed by centrifugation. All cells were then incubated with anti-CD16/CD32 followed by FITC-conjugated anti-mouse Ly-6G (Gr-1) for neutrophils. For analysis of intracellular cytokines, cells were fixed with Cytofix/Cytoperm solution and stained with PE-conjugated anti-IL-17A (eBioscience, San Diego, CA, USA). A FACSort flow cytometer was used for the acquisition of data, and analysis was made using CELLQuest software v5.2.1 (BD Biosciences, San Diego, CA, USA) [42 (link)].
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8

Cytokine Profiling of Lymphoid Cells

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Lymphoid cells were obtained from the thymus or spleen of wild-type (WT) (C57BL/6J), LDb or LTp mice at 5 months of age. For surface staining, we stained with PE or PerCp-Cy5.5 anti-CD4 (GK1.5), PerCp-Cy5.5 anti-CD8a (53-6.7), APC anti-CD44 (IM7), or Pacific Blue anti-γδTCR (UC7-13D5). For intracellular cytokine staining, isolated lymphoid cells were stimulated with PMA (100 ng/ml, Sigma-Aldrich, St. Louis, MO, USA) and ionomycin (1 μM, Sigma-Aldrich) in the presence of Brefeldin A and Monensin (eBioscience, San Diego, CA, USA) for 4 h, followed by surface staining. The cells were then resuspended in permeabilization buffer (eBioscience) for 30 min at 4°C, followed by staining with PE-conjugated anti-IL-17A (TC11-18H10.1), and Alexa488-conjugated anti-IFN-γ (clone: XMG1.2). The stained cells were analyzed by FACSAria II flow cytometer (BD Biosciences, San Jose, CA, USA), and the data were analyzed using FlowJo software (TreeStar, Ashland, OR, USA).
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9

Multiparametric flow cytometry analysis of Th17 and Treg cells

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The phycoerythrin (PE)-conjugated anti-IL-17A and fluorescein isothiocyanate (FITC)-conjugated anti-FoxP3 were purchased from eBioscience (San Diego, CA), and all other antibodies used in flow cytometry were from BD Biosciences (San Jose, CA). For immunostaining of intracellular IL-17A, two samples of freshly heparinized peripheral blood (200 µL each) were incubated for 6 hours with phorbol-12-myristate-13-acetate (PMA, 300 ng/mL, Sigma-Aldrich, St. Louis, MO) and ionomycin (1 µL/mL, Sigma-Aldrich) in 800 µL of RPMI 1640 medium supplemented with 10% fetal calf serum. Monensin (0.4 µM, BD PharMingen) was added during the first hour of incubation. Then cytofix/cytoperm kit (BD PharMingen), anti-CD3, anti-CD8, anti-IL17, and anti-IFN-γ antibody (mAb) were used in one sample, whereas anti-CD4, anti-CD25, and anti- FoxP3 mAb were used in the other sample according to the manufacturers’ protocols. For Tregs analysis, anti-CD4, anti-CD25, and anti-HLA-DR mAb were added to 200 µL freshly heparinized blood sample, and then the sample was permeabilized and fixed using fix/perm kit (eBioscience) according to the manufacturer’s instructions. After permeabilization, cells were incubated with anti-FoxP3, anti-CTLA-4, and anti-Ki67 mAb. The stained cells were acquired on a FACSCalibur (BD Biosciences) and analyzed using FlowJo software (Tritar, USA).
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10

Multiparametric Immune Profiling Protocol

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Fluorescein isothiocyanate (FITC)-conjugated anti-CD38, Alexa 488-anti-CXCR5, Alexa F-647-anti-CXCR5, phycoerythrin (PE)-conjugated anti-IL-21, PE-Cy7-conjugated anti-CD4, allophycocyanin (APC)-conjugated anti-IL-6 and FITC-conjugated anti-IFN-gamma were purchased from BD Bioscience and BD Pharmingen™ (San Diego, CA, USA). FITC-conjugated anti-CD3, PE-conjugated anti-ICOS, PE-conjugated anti-IL-17a, peridinin chlorophyll protein (PerCP)-conjugated anti-CD4 and anti-CD8 and APC-conjugated anti-CD279 (PD-1) were purchased from eBioscience (San Diego, CA, USA); and APC-Cy7-conjugated anti-CD3 and anti-CD27, PE-conjugated anti-CD24, PE-Cy7-conjugated anti-CD19 and PerCP-Cy5.5-conjugated anti-IgD were purchased from BioLegend (San Diego, CA, USA). Peripheral blood mononuclear cells (PBMCs) were isolated and phenotypic analysis performed using optimal concentrations of mAbs according to standard protocols (25 (link), 26 (link)). Aliquots of cells were also utilized for flow cytometry and FlowJo software analysis (Tristar Inc, San Carlos, CA, USA). At least 50,000 events per sample were analyzed.
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