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14 protocols using l asparaginase

1

Coculture and Nutrient Deprivation Assay

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Before coculture, TSCs were maintained at 32 °C. Upon coculture, TSCs and cancer cells were trypsinized, counted, mixed in a 1:5 (cancer cell:TSC) ratio, and plated in 50:50 DMEM/RPMI supplemented with 10% FBS on a 96-well microplate at 37 oC overnight. The next day, medium was replaced with modified nutrient-deprived medium with or without 40 μg/ml collagen I as indicated. For antibody blockade, 50 μg/ml of m830 antibody was preincubated with CHO or CHO-TEM8 cells on ice for 30 min prior to mixing at a 1:5 ratio with cancer cells overnight and replenished the next day along with the other media modifications. For L-asparaginase treatment, 2 mU/mL L-asparaginase (Sigma, A3809) was added to the modified nutrient-deprived medium with or without 40 μg/ml collagen I as indicated. After 48 h at 37 °C, the viability of luciferase-tagged cancer cells was measured using luciferin as described above.
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2

Evaluation of Apoptosis and Stemness

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Hoechst 33342, verapamil, glutaminase, L-asparaginase, and 3-Amino-1,2,4-triazole (ATZ), 3-(4,5 dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT), hydroethidine, Rhodamine 123 were purchased from Sigma (St Louis, MO, USA). Rabbit monoclonal anti-Axin2 (D48G4), rabbit monoclonal anti-Survivin (71G4B7), rabbit polyclonal anti-phospho-β-catenin (Ser33/37/Thr41), rabbit monoclonal anti-phospho-Akt (Ser473) antibodies were obtained from Cell Signaling Technology (Danvers, MA, USA). Mouse monoclonal anti-c-Myc (9E10) was purchased from Santa Cruz (Santa Cruz, CA, USA). Rabbit polyclonal anti-CyclinD1 antibody was obtained from GeneTex (San Antonio, TX, USA). Mouse monoclonal anti-β-catenin (C47H1), rabbit monoclonal anti-Sox-2, rabbit monoclonal anti-ABCG2, and mouse monoclonal anti-β-actin antibodies were purchased from Abcam (Cambridge, UK). CM-DCFDA, Lipofetamine RNAiMAX and Opti-MEM were purchased from Invitrogen Life Technologies (Carlsbad, CA, USA).
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3

Metabolic Inhibitors in Cell Culture

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L-methionine sulfoximine (MSO; Sigma M5379) at 100 μM for cultured cells or tissues and 10 mg/kg for mouse experiments, L-asparaginase (ASNase) at 0.5 IU/ml for cultured cells and 3 IU/g for mouse experiments, 6-Diazo-5-oxo-L-norleucine (L-DON; Sigma D2141) at 25 μM, BPTES (Sigma SML0601) at 10 μM, aminooxyacetic acid (AOA, Sigma C13408) at 500 μM, epigallocatechin gallate (EGCG, kindly provided by Dr. Yukihiko Hara at Tea Solutions, Hara Office Inc) at 50 μM, μ-chloro-L-alanine (Santa Cruz Biotechnology sc-291972) at 250 μM, cycloserine (Sigma C1159) at 250 μM, Direct Red 80 (Sigma 365548), Picric acid (Sigma 197378), OSMI-1 (Sigma #SML1621) at 50 μM. Stable isotope tracers were purchased from Cambridge Isotope Laboratories (15N-NH4Cl, NLM-467-PK; 13C5-aKG, CLM-2411-PK).
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4

Cytotoxicity Assay of Chemotherapeutics

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A total of 2×104 cells/well seeded in 96-well plates were cultured in 90 µl RPMI-1640 medium supplemented as aforementioned (Gibco; Thermo Fisher Scientific, Inc.) at 37°C for 12 h and then treated with 10 µl doxorubicin, cytarabine, cisplatin, gemcitabine and L-asparaginase (all Sigma-Aldrich; Merck KGaA) separately in each well with a concentration gradient for 48 h. Cell Counting Kit (CCK)-8 solution (20 µl, 5 mg/ml; Dojindo Molecular Technologies, Inc.) was used to detect the activity of cells according to the manufacturer's instructions. The absorbance was measured at 450 nm using a Multiskan FC microplate reader (Thermo Fisher Scientific, Inc.). The inhibition rate (%) was calculated as follows: (ODcontrol-ODtreatment/ODcontrol) ×100. Independent experiments were repeated at least three times.
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5

Xenograft Model of NK-92 MI Cell Tumor

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Animal experiments were approved by the experimental animal ethics committee of Fudan University. NK-92 MI cells were stably transfected with luciferase gene and named NK-92 MI Luc. NK-92 MI or NK-92 MI Luc cells were mixed with high concentration Matrigel (Corning) and injected subcutaneously into the right flank regions of 8-week-old female NOG mice (Vital River Laboratory Animal Technology), 5 × 106 cells per mouse. When the tumor volume reached 300 mm3, the mice were randomized into different groups and treated at the indicated days with vehicle, or ICT and/or GELOX regimen. ICT, gemcitabine (CSN Pharm), and oxaliplatin (CSN Pharm) were prepared in 5% DMSO and 40% polyethylene glycol 400 (CSNpharm), 5% Tween-80 (CSNpharm), and 50% PBS. L-asparaginase (Sigma) was prepared in PBS. The tumor length and width and mice weight were measured every other day. The tumor volume (mm3) was calculated using the following formula: V = 0.52 × length × width2. Bioluminescence imaging was performed using IVIS (PerkinElmer) imaging system. Live animal images were acquired 10 min after intraperitoneal injection of D-Luciferin (3 mg/mouse; Beyotime). The mice were euthanized and tumor tissues were collected and weighed after treatment finished.
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6

NK Cell Viability Assay

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A total of 5 × 104 cells from NK cell lines (n = 6) in 1-mL medium were seeded into 24-well plates in duplicates. Cells were treated with 0, 0.01, 0.05, 0.075, 0.1, or 0.5 IU of l-asparaginase (Sigma-Aldrich) for 24 or 48 hours. Cell survival was determined after the treatment using Cell Titer Glo Luminescent Cell Viability Assay (Promega Inc.) or Vi-CELL XR Cell Viability Analyzer (Beckman Coulter Inc.) according to the manufacturers' recommendations.
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7

Metabolic Inhibitors in Cell Culture

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L-methionine sulfoximine (MSO; Sigma M5379) at 100 μM for cultured cells or tissues and 10 mg/kg for mouse experiments, L-asparaginase (ASNase) at 0.5 IU/ml for cultured cells and 3 IU/g for mouse experiments, 6-Diazo-5-oxo-L-norleucine (L-DON; Sigma D2141) at 25 μM, BPTES (Sigma SML0601) at 10 μM, aminooxyacetic acid (AOA, Sigma C13408) at 500 μM, epigallocatechin gallate (EGCG, kindly provided by Dr. Yukihiko Hara at Tea Solutions, Hara Office Inc) at 50 μM, μ-chloro-L-alanine (Santa Cruz Biotechnology sc-291972) at 250 μM, cycloserine (Sigma C1159) at 250 μM, Direct Red 80 (Sigma 365548), Picric acid (Sigma 197378), OSMI-1 (Sigma #SML1621) at 50 μM. Stable isotope tracers were purchased from Cambridge Isotope Laboratories (15N-NH4Cl, NLM-467-PK; 13C5-aKG, CLM-2411-PK).
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8

Evaluation of Anticancer Drug Synergy

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CCRF-CEM and MDA MB231 cells were treated with FK866, CHS-828 (200484-11-3, Cayman Chemical), oligomycin A (75351, Sigma), 2-deoxyglucose (D8375, Sigma), GSK2837808A (GSK) (5189, Tocris), JPH203 (a selective L-type amino acid transporter), and l-asparaginase (11185, Sigma) for 48 h. JPH203 was kindly obtained from Dr. Peyron [30 (link)]. In vitro drug sensitivity was assessed by the colorimetric methyl-thiazolyltetrazolium (MTT) assay (sigma), XTT proliferation kit (sigma), and OZBlue Cell Viability kit (OZbiosciences). Combination treatment of FK866 with JPH203 was performed and 48 h after combination treatment, Cell viability was determined using XTT assay (Invitrogen) and DAPI staining. Percentage of cell death was subjected for drug combination analysis as described by combination index (CI). CI was analyzed using CompuSyn software V1.0 by the method of Chou and Talalay [31 (link)]. CI < 1 indicates drug synergistic effect, CI > 1 indicates drug antagonistic effect, and CI = 1 indicates drug additive effect.
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9

GH3 Cell Clonogenic Assay

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GH3 cells were plated at 200 cells/well in 6-well plates in complete F-12K, in the absence or presence of Gln or 1 U/mL L-asparaginase (Sigma, A3809) and 1 mM L-methionine sulfoximine (Sigma, M5379) as indicated. After 14 days, cells were fixed with 4% paraformaldehyde and stained with 0.1% crystal violet. Visible colonies were manually counted.
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10

Pharmacological profiling of T-ALL

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Primary T-ALL cells collected from pediatric patients at diagnosis were isolated as described. 14 T-ALL primary cells, cell lines and Ba/F3 cells were cultured at 37°C with a 5% CO2 atmosphere in RPMI-10 alone (with the appropriate vehicle), RPMI (when indicated) or in RPMI-10 plus the following pharmacological agents: 4-hydroxy-tamoxifen (4OHT; Sigma); NVP-BEZ235 (Selleckchem); LY294002 (Cayman Chemical), daunorubicin (Selleckchem); dexamethasone (Sigma) and L-asparaginase (Sigma). At defined time points, cells were harvested and processed as indicated below for assessment of cell viability, RNA extraction and immunobloting.
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