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4 6 diamidino 2 phenylindole dapi solution

Manufactured by Beyotime
Sourced in China, Japan

4',6-diamidino-2-phenylindole (DAPI) solution is a fluorescent dye commonly used in molecular biology and microscopy applications. DAPI selectively binds to double-stranded DNA, emitting a blue fluorescence when excited by ultraviolet light. This property makes DAPI a useful tool for visualizing and staining cell nuclei.

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17 protocols using 4 6 diamidino 2 phenylindole dapi solution

1

Immunostaining of Actin and RUNX2 in Cell Constructs

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The cell/scaffold construct was fixed, permeabilized and blocked for immunofluorescence staining. The actin cytoskeleton was stained with Acti-stain 488 phalloidin (1:200; Cytoskeleton, USA). The cell nuclei were stained with 4′,6-diamidino-2-phenylindole (DAPI) solution (Beyotime, China). The stained cells were imaged using fluorescence microscopy (Olympus, Japan).
For RUNX2 protein evaluation, the primary antibody against RUNX2 (1:2000; Abcam, USA) was incubated for 2 h before Acti-stain 488 phalloidin and DAPI staining. An Alexa Fluor 647-conjugated secondary antibody (1:400, Abcam, USA) for RUNX2 was added for 1 h.
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2

circZDBF2 RNA FISH Analysis

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The circZDBF2-specific RNA FISH probe procured from Ribobio was used for cellular analysis as instructed by provider. The fixed cell samples were rinsed in PBS, and then air-dried, followed by the hybridization with FISH probe. Cell nuclei were stained using 4',6-diamidino-2-phenylindole (DAPI) solution purchased from Beyotime (Shanghai, China), and the fluorescent images were captured by GLomax20/20 fluorescence microscope (Promega).
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3

Limonin Pharmacological Assays Protocol

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Limonin (C32H42O14, purity ≥98%) was purchased from Solarbio (Beijing, China). Diaminobenzidine (DAB) developer, pentobarbital sodium, and the hematoxylin and eosin (H&E) staining kit were provided by Solarbio (Beijing, China). Rabbit anti–cadherin 5 was purchased from Boster Biological Technology (A02632–2). Rabbit anti-GAPDH was acquired from Biogot Technology (AP0063). Rabbit anti–vascular endothelial growth factor (VEGF), anti–superoxide dismutase 1 (SOD1), anti–matrix metalloproteinase 9 (MMP9), anti-HO-1, and anti-CAPS3 were acquired from Proteintech (19003-1, 10269-1, 10375-2, 21327-1, and 19677-1). Rabbit anti–endothelial nitric oxide synthase (eNOS), anti–cytochrome c (CYC), and anti-Bax were purchased from Cell Signaling Technology (12994, 14796, and 32027). Horseradish peroxidase (HRP)–conjugated immunoglobulin G (IgG) secondary antibody was purchased from Santa Cruz Biotechnology. Fluorescein isothiocyanate (FITC)–conjugated IgG secondary antibody was obtained from Boyun Biotechnology, and the 4′,6-diamidino- 2-phenylindole (DAPI) solution was purchased from Beyotime Biotechnology. The Electrochemiluminescence (ECL) Plus Reagent Kit was obtained from PerkinElmer Life Sciences and the BCA kit was acquired from TermoFisher Scientifc.
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4

Immunofluorescence Analysis of Colon AQP3

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The colon of the rat was fixed in 4% paraformaldehyde for 24 h and embedded in paraffin, and tissue sections (5 μm) of the colon were prepared for immunofluorescence analysis. For in vitro experiments, HT-29 cells were plated in 12-well plates and treated with drug serum or PMA (1 μM; Beyotime, Shanghai, China) for 24 h. After washing with PBS twice, cells were fixed in 4% paraformaldehyde for 10 min at room temperature and prepared for immunofluorescence analysis.
For immunofluorescence analysis, tissue sections (5 μm) of the colon or HT-29 cells were permeabilized with 0.1% Triton X-100, blocked with 5% BSA, and then incubated with primary rabbit anti-AQP3 antibody (ab125219; Abcam, CA, USA) overnight at 4°C. Then, the tissue and cells were washed twice with PBS/0.1% Tween-20 and incubated with a secondary goat anti-rabbit antibody conjugated with Alexa Fluor 488 for 1 h at room temperature. Then, the tissue and cells were reacted with 4, 6-diamidino-2-phenylindole (DAPI) solution (Beyotime) in PBS at room temperature for 5 min and then observed under a fluorescence microscope (Olympus Corporation, Tokyo, Japan) and photographed. The expression level of AQP3 in rat colon or HT-29 cells was analyzed by ImageJ software.
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5

Immunofluorescence Assay for Chondrocyte COL2A1

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The chondrocytes were inoculated in a 12-well plate (cell density: 2.0 × 105/well), and then treated with 10−8 M 1α,25-(OH)2D3 and/or 2 μM Cd acetate for 72 h. After treatment, the chondrocytes were washed in PBS for 2 min on a shaker, fixed in 4% paraformaldehyde at room temperature for 30 min and subsequently washed in PBS 3 times. The chondrocytes were then treated with 0.4% Triton X-100 (Amresco, USA) for 20 min, the antigens blocked with 5% bovine serum albumin at room temperature for 30 min, incubated with anti-COL2A1 primary antibodies (Abcam, UK) overnight at 4°C, washed 3 times in PBS, and then incubated with fluorescence secondary antibodies (Cell Signaling, USA) in the dark for 1 h. The cytoskeletons of chondrocytes were stained with phalloidin solution at room temperature for 15 min. After rinsing with PBS, the chondrocytes were further incubated with 4',6-diamidino-2-phenylindole (DAPI) solution (Beyotime, China) at room temperature for 5 min nuclear staining. The glass slip in each culture plate well was removed and placed upside down on a glass slide with anti-fluorescence quenching and mounting medium, sealed with nail polish, air-dried, and stored in the dark at 4°C before observing and photographing under a laser confocal microscope (Leica).
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6

Evaluation of DNA Fragmentation in BPH Ovarian Cells

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Brown planthopper ovaries were separately collected on the 1st, 3rd, and 5th day post dsRNA injection. The DNA fragmentation in BPH ovarian cells was evaluated with the DeadEndTM Fluorometric TdT-mediated dUTP Nick-End Labeling (TUNEL) System (Promega) according to the manufacturer’s instructions. The fluorescein-12-dUTP provided in the kit was used to label the broken DNA in apoptotic cells. The nuclei were counterstained with a 4′,6-diamidino-2-phenylindole (DAPI) solution (Beyotime Biotechnology). Apoptotic cells labeled positively by fluorescein-12-dUTP (green fluorescence) and total cells with a DAPI staining (blue fluorescence) were imaged under a Zeiss LSM780 confocal laser scanning microscope (Zeiss, Göttingen, Germany).
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7

Immunofluorescence Staining of Cells

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Cells were plated on the round coverslip (Biosharp, Hefei, Anhui, China) at a density of 105 cells/coverslip. After washing with PBS, cells were fixed with 4% formaldehyde for 10 min, permeabilized with 0.5% Triton X‐100 for another 10 min and blocked with 5% bovine serum albumin. The coverslips were then incubated with primary antibodies at 4°C overnight and Alexa Fluor 594‐conjugated goat anti‐rabbit IgG (#AS039, dilution 1:250, ABclonal, Wuhan, Hubei, China) at room temperature for 2 h. Nuclei were stained with 4',6‐diamidino‐2‐phenylindole (DAPI) solution (#C1002, Beyotime) at room temperature for 15 min, and the images were captured by a DMI3000B fluorescence microscope (Leica, Wetzlar, Hessen, Germany).
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8

Flow Cytometry Analysis of Immune Cells

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Anti-mouse monoclonal antibodies directly conjugated with fluorescein were used for flow cytometry: anti-F4/80 FITC, anti-CD11b PC7, anti-CD206 APC, and anti-CD80 PE (BD Pharmingen, USA) and anti-CD16/CD32, anti-CD45 mCHERRY, anti-CD3 FITC, anti-CD4 APCA750, anti-CD8 APC, anti-PD1 PE, anti-TIM3 PC7, and anti-CD25 BV450 (BioLegend, USA). Primary anti-mouse antibodies purchased are as follows: F4/80, Arg1, p-MerTK, and MerTK (Abcam, USA); p-p38, p38, p-STAT3, and STAT3 (Cell Signaling Technology, USA); and PD-L1 and GAPDH (Proteintech, USA). Horseradish peroxidase (HRP)-conjugated IgG secondary antibodies, 7-Amino-Actinomycin D (7AAD), and Lipofectamine 3000 were purchased from Thermo Fisher Scientific (USA). Fluorescein isothiocyanate (FITC)- and Alexa Fluor 647-conjugated IgG secondary antibodies, as well as 4′,6-diamidino-2-phenylindole (DAPI) solution, were obtained from Beyotime Biotechnology (Nanjing, China). The PKH26 Red Fluorescence Cell Linker Kit was from Sigma-Aldrich (USA).
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9

Immunofluorescence Staining of SARS-CoV-2 Cardiac Tissue

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The LA tissue used for immunofluorescence staining was obtained from the SARS-CoV-2 (+) patient, whose IL-6 levels and IL-1β levels were approximately 55- and 110-fold higher than those of SARS-CoV-2 (−) patients. The fixed cardiac tissue sections were deparaffinized by a series of solutions including xylene, gradient alcohol, and pure water. High-temperature antigen retrieval was performed. After blocking, the IL-6 antibody (Zen-bio, China) or IL-1β antibody (Zen-bio) was added onto the sections and incubated at 4 ℃ overnight. Subsequently, the sections were washed three times with phosphate buffered saline (PBS). The sections were then incubated with fluorescein isothiocyanate (FITC)-labeled or Cy3-labeled goat anti-rabbit secondary antibody (Beyotime, China) at 37 ℃ for 1 h. Three additional washes with PBS were performed. The sections were then incubated with 4',6-diamidino-2-phenylindole (DAPI) solution (Beyotime, China) at room temperature for 10 min. The fluorescence microscope (ZEISS, Germany) was used to detect the fluorescence for pathological evaluation.
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10

EdU Cell Proliferation Assay

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By use of the BeyoClick™ EdU Cell Proliferation Kit (Beyotime, Shanghai, China), EdU assay was implemented in DU145 and LNCAP as instructed by provider. After transfection, cells (1 × 105 per well) were seeded into 6-well plates before being washed with PBS, and then EdU medium was added into cells for 2 h. Next, 4% paraformaldehyde (PFA) was added for 15-min fixing. Cell nucleus was visualized via 4′,6-diamidino-2-phenylindole (DAPI) solution (Beyotime) using fluorescence microscope (Olympus, Tokyo, Japan). Each independent experiment was carried out at least thrice.
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