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6 protocols using anti cnβ

1

Purification and Cross-linking of PERK and CN Proteins

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GST-cPERK, MBP-cPERK, 6His-CNβ, 6His-CNα and 6His-CN-B protein purifications were performed as previously described (Bollo et al., 2010 (link); Li & Sousa, 2012 (link)). All recombinant proteins, even at concentrations of 1.0 to 1.2 mg/ml, showed no absorbance from 310 to 340 nm in absorption spectra (220 to 350 nm), supporting the absence of aggregates in the solution. Recombinant proteins His-CNβ and GST-cPERK (or MBP-cPERK) were incubated in the presence of 0.3 mM DSS cross-linker (#21658; Thermo Scientific,) for 30 min at room temperature. Reactions were quenched in 1 M tris (hydroxymethyl) aminomethane hydrochloride (Tris HCl; pH, 7.5) for 15 min at room temperature. The protein complexes were analyzed by SDS-PAGE (4% to 12%) and detected by immunoblotting either with anti-PERK antibody (PERKUT) or with anti-CNβ (#07–068; Millipore).
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2

Western Blot Analysis of Signaling Proteins

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Western blot analysis was performed using 30 µg of total protein in cell lysates. The following antibodies were used in this study: anti-CNα (#07–067; Millipore), anti-CNβ (#07–068;Millipore), anti-actin (#MAB1501; Millipore), anti-CN-B (#07–069; Millipore), and anti-GFP (#111258; Abcam), anti-P-PERK (#3179; Cell signaling Technology), anti-T-PERK (#3192; Cell signaling Technology), anti-P-eIF2α (#3597; Cell signaling Technology), and anti-T-eIF2α (#9722; Cell signaling Technology).
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3

Purification and Cross-linking of PERK and CN Proteins

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GST-cPERK, MBP-cPERK, 6His-CNβ, 6His-CNα and 6His-CN-B protein purifications were performed as previously described (Bollo et al., 2010 (link); Li & Sousa, 2012 (link)). All recombinant proteins, even at concentrations of 1.0 to 1.2 mg/ml, showed no absorbance from 310 to 340 nm in absorption spectra (220 to 350 nm), supporting the absence of aggregates in the solution. Recombinant proteins His-CNβ and GST-cPERK (or MBP-cPERK) were incubated in the presence of 0.3 mM DSS cross-linker (#21658; Thermo Scientific,) for 30 min at room temperature. Reactions were quenched in 1 M tris (hydroxymethyl) aminomethane hydrochloride (Tris HCl; pH, 7.5) for 15 min at room temperature. The protein complexes were analyzed by SDS-PAGE (4% to 12%) and detected by immunoblotting either with anti-PERK antibody (PERKUT) or with anti-CNβ (#07–068; Millipore).
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4

Immunoprecipitation and Immunoblotting Protocol

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Cell lysates were incubated with 0.3 mM DSS for 30 min, and microsomal fractions were obtained as described previously (Bollo et al., 2010 (link)). Anti-CNβ (5 µg) (#07–068; Millipore, (25) was added. After incubation overnight, the immune complex was washed and the eluted proteins were separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and detected by immunoblotting with anti-PERK (PERKUT).
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5

Immunoprecipitation and Immunoblotting Protocol

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Cell lysates were incubated with 0.3 mM DSS for 30 min, and microsomal fractions were obtained as described previously (Bollo et al., 2010 (link)). Anti-CNβ (5 µg) (#07–068; Millipore, (25) was added. After incubation overnight, the immune complex was washed and the eluted proteins were separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and detected by immunoblotting with anti-PERK (PERKUT).
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6

Western Blot Analysis of Signaling Proteins

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Western blot analysis was performed using 30 µg of total protein in cell lysates. The following antibodies were used in this study: anti-CNα (#07–067; Millipore), anti-CNβ (#07–068;Millipore), anti-actin (#MAB1501; Millipore), anti-CN-B (#07–069; Millipore), and anti-GFP (#111258; Abcam), anti-P-PERK (#3179; Cell signaling Technology), anti-T-PERK (#3192; Cell signaling Technology), anti-P-eIF2α (#3597; Cell signaling Technology), and anti-T-eIF2α (#9722; Cell signaling Technology).
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