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2 protocols using 1 2 13c xylose

1

Isotopic Tracer Analysis of Glucose Metabolism

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Chemicals and M9 minimal medium were purchased from Sigma-Aldrich (St. Louis, MO). Isotopic tracers were purchased from Cambridge Isotope Laboratories (Tewksbury, MA): [1,6-13C]glucose (99.2 % 13C), [1,2-13C]glucose (99.7 %), [1-13C]glucose (99.5 %), [2-13C]glucose (99.5 %), [3-13C]glucose (99.5 %), [4,5,6-13C]glucose (99.5 %), and [1,2-13C]xylose (99.2 %). The isotopic enrichment of all tracers and the composition of tracer mixtures used in parallel labeling experiments were validated by GC-MS analysis as described in (Sandberg et al., 2016 (link)) and (Cordova and Antoniewicz, 2016 (link)). SFM4CHO medium (GE Healthcare Life Sciences SH3054901) and DMEM medium (Corning 17-207-CV, without glucose, glutamine, and sodium pyruvate) were purchased from Fisher Scientific (Pittsburgh, PA).
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2

Glucose and Xylose Isotopic Tracing

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Media and chemicals were purchased from Sigma-Aldrich (St. Louis, MO). Tracers were purchased from Cambridge Isotope Laboratories: [1,2-13C]glucose (99.9 atom% 13C), [1,6-13C]glucose (99.6%), [U-13C]glucose (99.3%), [1,2-13C]xylose (99.3%), [5-13C]xylose (99.6%), and [U-13C]xylose (99.3%). The isotopic purity of all glucose tracers was determined by GC-MS (Long et al., 2016a (link)). MOPS minimal medium was used for all experiments.
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