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14 protocols using mitosox red

1

Quantifying Cellular and Mitochondrial ROS

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To quantify cellular and mitochondrial reactive oxygen species (ROS) levels, cells were incubated with 5 μM CellROX Green (for cellular ROS; Thermo Fisher Scientific) or MitoSOX red (for mitochondrial ROS; Thermo Fisher Scientific) for 30 min. The cells were subsequently treated with TrypLE Express (Thermo Fisher Scientific) to detach them from the culture plate. The fluorescence signals of 10,000 cells were measured using a FACSCalibur instrument (BD Bioscience). The geometric means of the fluorescence signals were calculated using the Cell Quest software (BD Bioscience).
Mitochondrial ROS levels were determined using confocal microscopy as previously described.31, 32, 33 In brief, cells were cultured in μ‐dishes (Ibidi) and subsequently incubated with 5 μM MitoSOX red (Thermo Fisher Scientific) and 20 nM MitoTracker Green FM (Thermo Fisher Scientific) for 30 min. Fluorescent images of MitoSOX red and MitoTracker Green FM were acquired using a Nikon C2 confocal microscope. The fluorescence intensity of MitoSOX red and MitoTracker Green FM was measured using the NIS‐Elements software (Nikon). To determine mitochondrial ROS levels, the fluorescence intensities of MitoSOX red were divided by that of MitoTracker Green FM.
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2

Measuring Mitochondrial Reactive Oxygen Species

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In order to measure mitochondrial reactive oxygen species (ROS) levels, the cells were cultured in μ-dishes (ibidi, Munich, Germany) and then incubated with 5 μM MitoSOX Red (Thermo Fisher Scientific) and 1 μM Mitotracker Green (Thermo Fisher Scientific) for 30 min at 37 °C. Fluorescent images of MitoSOX Red and Mitotracker Green signals were acquired using a Nikon C2 confocal microscope (Nikon). The fluorescence intensity of MitoSOX Red and Mitotracker Green were measured using the NIS-Elements software (Nikon). The intensity of MitoSOX Red was divided by that of Mitotracker Green to calculate mitochondrial ROS production per mitochondrion.
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3

Mitochondrial Superoxide Detection in C2C12 Myotubes

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C2C12 myotubes were incubated in 2 ml Dulbecco's phosphate-buffered saline (D-PBS) containing 250 nM MitoSOX Red (Invitrogen, Paisley, UK) for 30 min at 37 °C [29] (link). Myotubes were washed twice with D-PBS and were maintained in MEM without Phenol Red during the experimental period. MitoSOX Red is a derivative of dihydroethidium (DHE) designed for the selective detection of superoxide in mitochondria and exhibits fluorescence (MitoSOX Red fluorescence) upon oxidation and subsequent binding to mitochondrial DNA (Fig. 1) [30] (link).
The imaging system consisted of a C1 confocal laser-scanning microscope (Nikon Instruments Europe BV, Surrey, UK) equipped with a 405 nm excitation diode laser, a 488 nm excitation argon laser and a 543 nm excitation helium–neon laser. Emission fluorescence was detected through a set of 450/35, 515/30 and 605/15-emission filters. Using a ×40 objective, fluorescence images were captured and analysed with the EZC1 V.3.9 (12 bit) acquisition software. To quantify the degree of co-localisation of fluorescent probes in C2C12 myotubes, NIH Image J software was used. Co-localisation coefficients: Pearson's correlation (Rr) coefficient, Mander's overlap (R) coefficient and Manders's co-localisation coefficient for each image; channel 1 (Mred) and channel 2 (Mgreen) were calculated over the entire confocal image [29] (link).
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4

Quantifying Mitochondrial ROS Levels

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Mitochondrial reactive oxygen species (ROS) levels were determined using flow cytometry and confocal microscopy, as previously described [33 (link)]. To determine mitochondrial ROS levels using flow cytometry, the cells were incubated with 5 µM of MitoSOX Red (Thermo Fisher Scientific) for 30 min. The cells were subsequently treated with TrypLE Express (Thermo Fisher Scientific) to detach them from the culture plate. The fluorescence signal of 10,000 cells was measured using a FACSCalibur instrument (BD Biosciences). The geometric means of the fluorescence signals were measured using the Cell Quest software version 3.3 (BD Biosciences).
To determine the mitochondrial ROS levels using confocal microscopy, the cells were cultured in μ-dishes (Ibidi, Munich, Germany) and subsequently incubated with 5 µM of MitoSOX Red (Thermo Fisher Scientific) and 20 nM of MitoTracker Green FM (MTG) (Thermo Fisher Scientific) for 30 min. Fluorescence images of MitoSOX Red and MTG were acquired using a Nikon C2 confocal microscope. The fluorescence intensity of MitoSOX Red and MTG was measured using the NIS-Elements AR software version 4.00.06 64-bit (Nikon).
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5

Mitochondrial Superoxide Detection

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The mitochondria reactive oxygen measurement was conducted according to the manufacture protocol (Invitrogen, Carlsbad, CA, USA). Applied 2.0 mL of 5 μM MitoSOX™ to IPEC-J2 and sealed for 10 min at 37 °C. The MitoSOX™ Red mitochondrial superoxide indicator was measured using Nikon fluorescence microscope (Tokyo, Japan) and BD cytometry (San Jose, CA, USA).
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6

Mitochondrial Superoxide Detection Using MitoSox Red

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Mitochondrial superoxide was determined as previously described by using Mitosox Red (Life technologies)[22 (link)–24 (link)]. Neurons were incubated with 2 μM Mitosox Red and 200 nM mitotracker green (Life Technology) for 30 minutes followed by washing. The images of Mitosox Red staining were collected on a Nikon inverted confocal microscope with on stage incubator. The intensity was subsequently analyzed by using Nikon NIS Advanced Research software.
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7

Mitochondrial Superoxide Quantification

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Mitochondrial superoxide levels were determined by the staining of Mitosox Red (Thermo Fisher Scientific). Briefly, neurons were incubated with 1 μM Mitosox Red in neuron culture medium for 30 min in an incubator (5% CO2, 37 °C) followed by washing. Afterwards, neurons were fixed in 4% paraformaldehyde and subjected to DAPI staining to visualize nuclear. The images were collected on a Nikon confocal microscope. The intensity of Mitosox Red was subsequently analyzed by using Nikon NIS Advanced Research software.
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8

Mitochondrial ROS Measurement in Endothelial Cells

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Mitochondrial reactive oxygen species generation was measured using a mitochondrial targeted fluorogenic probe MitoSOX™ Red [34 (link)], and we previously confirmed that MitoSOX fluorescence in endothelial cells is attenuated by scavenging superoxide [28 (link),35 (link)]. bEnd.3 cells seeded in black-walled, clear-bottomed 96-well plates were cultured under 18 or 5 kPa O2 for 5 d and then incubated in serum-free DMEM in the absence or presence of rotenone (1 μM, complex 1 inhibitor) or l-NAME (100 μM, eNOS inhibitor). Cells were exposed to hypoxia (1 kPa O2, 1 h) and loaded with MitoSOX™ Red (5 μM, Invitrogen) for 5 min before the start of reoxygenation under 18 or 5 kPa O2, respectively. Cells were washed twice with ice-cold PBS and fixed with 4% paraformaldehyde for 10 min before staining nuclei with DAPI (2 μg/ml, Sigma). MitoSOX™ Red fluorescence (Ex 545 nm/Em 602 nm) was detected using a Nikon Diaphot microscope, with images captured using an ORCA-03G (Hamamatsu, Japan) camera with 0.89 s exposure. Fluorescence quantification was conducted using image analysis software (ImageJ, NIH, USA), measuring the integrated intensity of fluorescence, area of field of view and mean grey value.
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9

Quantifying Mitochondrial Superoxide in Neurons

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Mitochondrial superoxide was determined by using Mitosox Red (Thermo Fisher Scientific, M36008). Primary cultured hippocampal neurons with a density of 2 × 104 per well on Lab-Tek chamber slides (Nunc, 177,445) were pre-incubated with 2.5 µM Mitosox Red and 400 nM MitoTracker Green or 5 µM DCF for 20 min in an incubator (5% CO2, 37 °C) followed by a wash with pre-warmed Neurobasal A medium. Pre-stained neurons were treated with Oligomycin A as indicated in the previous section. 20 nM Hoechst (Thermo Fisher Scientific, 33342) was used to label the nucleus in live cells. The images of Mitosox Red were collected on a Nikon confocal microscope with on-stage incubator (5% CO2, 37 °C). The intensity was subsequently analyzed by using Nikon NIS Advanced Research Elements 4.13.00. Intra-neuronal superoxide was determined by CM-H2DCFDA (DCF, Thermo Fisher Scientific, C6827) staining as previously described14 (link),26 . Images of DCF staining were collected on a Nikon inverted microscope. The intensity was subsequently analyzed by using Addgene.
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10

Measuring Cytoplasmic and Mitochondrial ROS

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CM-H2DCFDA (Thermo Scientific) and MitoSOX Red (Thermo Scientific) staining were used for detecting cytoplasmic and mitochondrial ROS levels, respectively. Cells were seeded in 24-well plates and cultured in normoxia or hypoxia for 24 h. Subsequently, cells were incubated with 10 μM CM-H2DCFDA for 30 min or 5 μM MitoSOX Red for 10 min at 37°C, and fluorescence was captured by immunofluorescence microscope (Nikon, Tokyo, Japan) at 20 × magnification. Immunofluorescence density was quantified by Image J software (U. S. National Institutes of Health, MD, United States) and normalized by the siControl normoxia group.
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