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3 3 diaminobenzidine (dab)

Manufactured by Zeiss
Sourced in Germany

The DAB (3,3'-Diaminobenzidine) is a chromogenic substrate used in histochemical and immunohistochemical techniques. It produces a brown-colored precipitate upon reaction with an enzyme, typically horseradish peroxidase (HRP), which can be visualized under a microscope. The DAB product is insoluble and stable, making it suitable for a range of biological and medical applications.

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6 protocols using 3 3 diaminobenzidine (dab)

1

Visualizing H2O2 Accumulation in Rice Plants

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To observe the H2O2 accumulation in rice plants, the leaves or the 5-cm-long leaf sheaths of the three- to five-leaf-stage seedlings were inoculated with M. oryzae strain Guy11 at the concentration of 5 × 105 conidia ml–1 as described previously (Kankanala et al., 2007 (link)). Then, the inoculated leaves or the excised epidermal layer of the leaf sheaths were incubated in 1 mg/ml 3,3′-diaminobenzidine (DAB; Sigma–Aldrich, Germany) at 22°C for 8 h. The DAB-stained leaves and leaf sheaths were cleaned in 95% ethanol and then observed under a microscope (Zeiss Imager A2, Carl Zeiss, Germany).
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2

Immunohistochemical Analysis of Tumor Tissues

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Immunohistochemical analysis of tumor tissues were carried out using sections derived from control and MESF treated tumor tissues as described earlier33 (link)34 (link). Sections were deparaffinized at 65°C using xylene, rehydrated, treated with 3% H2O2 and antigen retrieval was carried out at 100°C in 0.01% sodium citrate buffer. Sections were blocked using 0.1% BSA and 10% FBS for 1 h at room temperature and incubated with primary antibody (Ki67, 1:100) overnight at 4°C. After washing, sections were treated with secondary antibody conjugated with biotin (1:200) for 2 h at room temperature followed by streptavidin-HRP conjugated antibody (1:500) for 1 h. Finally, sections were treated with DAB, H202 and counterstained with haematoxylin, and images were captured (Zeiss, Germany).
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3

Visualizing ROS and NO in Fungal-Infected Plants

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Cellular ROS accumulation in fungal infected plant cells was analyzed by using DAB (Sigma, D-8001) staining method88 (link). Briefly, infected tissues were immersed in DAB solution (1 mg/ml, pH 3.8) at room temperature for 8 h and destained with decolorant solution (ethanol: acetic acid = 94: 4, v/v) for 1 h. The DAB-stained plant tissues were examined under a Zeiss LSM780 confocal microscope (Gottingen, Niedersachsen, Germany).
To assess NO production, fungal hyphae or plant tissue were stained using 10 μM DAF-FM DA (Sigma, Shanghai, China). To confirm genuine reaction between DAF-FM DA and NO, a cell-permeant NO scavenger cPTIO (Sigma) at 100 μM was included as a control. DAF-FM DA combined with or without cPTIO was directly applied towards plant tissues with or without Fg infection. Plant tissues or fungal hyphae were stained with DAF-FM DA dye for 30 min at room temperature and visualized in a bight/fluorescence field of view under a Zeiss LSM780 confocal microscope (Gottingen) at the excitation/emission wavelengths of 488/525 nm. Each experiment was repeated three times.
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4

Staining Techniques for Plant Seedlings

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For FDA and DAB staining, seedlings were stained with 2.5 µg/ml FDA (Sigma-Aldrich) in phosphate-buffered saline for 10 min or 1 mg/ml DAB (pH 5.5, Sigma-Aldrich) for 2 hr at room temperature, immersed into boiled ethanol for 10 min according to the standard protocol [31] (link). For PI and DAPI staining, samples were stained using DAPI (Sigma-Aldrich) at 1 µg/ml in 0.1% (v/v) Triton X-100 for 10 min or PI (Sigma-Aldrich) at 10 µg/ml for 1 min, and washed twice with water. For in situ TUNEL staining, roots were stained in microcentrifuge tubes (1.5 ml) using the in situ cell death detection kit (Takara) according to the manufacturer' instructions. Except DAB staining, which was observed under differential interference contrast (DIC) microscopy, other staining, BiFC and subcellular localization of mGFP-NAC089 were visualize with laser confocal fluorescence microscopy (Zeiss LSM A710).
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5

Visualizing H2O2 Accumulation in Rice

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To observe the H2O2 accumulation in rice plants, three-leaf-stage seedlings were inoculated with M. oryzae strain Guy11 at the concentration of 5 × 105 conidia mL−1. At 40 hpi, leaves were collected and incubated in 1 mg/mL DAB (Sigma, Merck Life Science Co., Ltd. Shanghai, China) at 22 °C for 8 h at illumination. The DAB-stained leaves were cleaned in 95% ethanol and then observed under a microscope (Zeiss imager A2, Carl Zeiss (Chengdu) Co. Ltd, China).
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6

Visualizing Rice H2O2 Response to M. oryzae

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For cellular response of rice to M. oryzae infection, the M. oryzae isolate ZB15 was inoculated on rice leaves. H 2 O 2 accumulation was monitored via staining with DAB as described by a previous report (Yin et al., 2015) . Leaf sections were placed in 1 mg mL -1 DAB (Sigma) and incubated at 22 C for 10 hr at illumination. The DAB-stained leaves were observed under a microscope (Zeiss imager A2).
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