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Uplc ltq orbitrap xl

Manufactured by Thermo Fisher Scientific
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The UPLC-LTQ-Orbitrap XL is a high-performance liquid chromatography-mass spectrometry (LC-MS) system. It combines a UPLC (Ultra-Performance Liquid Chromatography) system with an LTQ-Orbitrap XL mass spectrometer. The UPLC component provides high-resolution separation of complex samples, while the LTQ-Orbitrap XL offers accurate mass measurement and high-resolution data acquisition capabilities.

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4 protocols using uplc ltq orbitrap xl

1

UPLC-MS/MS Analysis of Plasma Metabolites

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Plasma extract samples (7 μL) were injected into an Acquity UPLC-BEH-C18 column (2.1 × 50 mm, 1.7 μm; Waters, Milford, MA) that was coupled in-line with a UPLC-LTQ-Orbitrap XL (Thermo Fisher Scientific, USA). The injected samples were equilibrated with water containing 0.1% formic acid. Samples were eluted with an acetonitrile gradient containing 0.1% formic acid at a flow rate of 0.35 mL/min for 20 min. Metabolites were separated by UPLC (Waters, Milford, MA), analyzed, and assigned by LTQ-Orbitrap-XL (Thermo Fisher Scientific, USA). The mass spectrometer was operated in ESI-positive mode. The spray voltage was 5 kV. The flow rate nitrogen sheath gas and the auxiliary gas were 50 and 5 (arbitrary units). The capillary voltage (V), tube-lens voltage (V), and capillary temperature (°C) were kept constant at 35 V, 80 V, and 370°C, respectively. The Orbitrap data were collected in the range of m/z 50–1,000. For quality control, a mixture of four standard compounds (acetaminophen, sulfadimethoxine, terfenadine, and reserpine) was injected into every 10th sample. The MS/MS spectra of metabolites were obtained by a collision-energy ramp from 55–65 eV, and analyzed with Xcalibur 2.1 and MS Frontier software (Thermo Fisher Scientific, USA).
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2

Metabolic Profiling of PBMC and Plasma

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PBMC and Plasma extract samples (4 μL) were injected into an Acquity UPLC-BEH-C18 column (2.1 × 50 mm, 1.7 μm; Waters, Milford, MA) that was coupled in-line with a UPLC-LTQ-Orbitrap XL (Thermo Fisher Scientific, Waltham, MA). The injected samples were equilibrated with water containing 0.1 % formic acid. Samples were eluted with an acetonitrile gradient containing 0.1 % formic acid at a flow rate of 0.35 mL/min for 20-min. Metabolites were separated by UPLC, analyzed, and assigned by LTQ-Orbitrap-XL. The mass spectrometer (MS) was operated in ESI-positive mode. The spray voltage was 5 kV. The flow-rate nitrogen sheath gas and the auxiliary gas were 50 and 5 (arbitrary units). The capillary voltage (V), tube-lens voltage (V), and capillary temperature (°C) were kept constant at 35 V, 80 V, and 370 °C. Orbitrap data were collected in the range of m/z 50–1,000. MS/MS spectra of metabolites were obtained by a collision-energy ramp from 55–65 eV, and conducted with Xcalibur 2.1 and MS Frontier software (Thermo Fisher Scientific).
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3

UPLC-Orbitrap Analysis of Plasma Metabolites

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The plasma extract samples (7 µL) were injected into an Acquity UPLC-BEH-C18 column (2.1×50 mm, 1.7 µm; Waters, Milford, MA) that was coupled in-line with a UPLC-LTQ-Orbitrap XL (Thermo Fisher Scientific, USA). The injected samples were equilibrated with water containing 0.1% formic acid. Samples were eluted with an acetonitrile gradient containing 0.1% formic acid at a flow rate of 0.35 mL/min for 20 minutes. Metabolites were separated by UPLC (Waters, Milford, MA), analyzed, and assigned by LTQ-Orbitrap-XL (Thermo Fisher Scientific, USA). The mass spectrometer was operated in ESI-positive mode. The spray voltage was 5 kV. The flow-rate nitrogen sheath gas and the auxiliary gas were 50 and 5 (arbitrary units). The capillary voltage (V), tube-lens voltage (V), and capillary temperature (°C) were kept constant at 35 V, 80 V, and 370°C. The Orbitrap data were collected in the range of m/z 50–1,000. For quality control, a mixture of four standard compounds (acetaminophen, sulfadimethoxine, terfenadine, and reserpine) was injected every ten samples. The MS/MS spectra of metabolites were obtained by a collision-energy ramp from 55–65 eV, and conducted with Xcalibur 2.1 and MS Frontier software (Thermo Fisher Scientific, USA).
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4

Metabolomic Analysis of Blood Samples

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The detailed methods for metabolomic analyses are included in the online-only Data Supplement. In brief, blood samples were collected after at least 8 hours of fasting within 24 hours of arrival at the hospital. After preparing the samples using the traditional chloroform/ methanol method, we conducted liquid chromatography-mass spectroscopic analysis for polar and nonpolar metabolites using an Ultra Performance Liquid Chromatography system (UPLC-LTQ-Orbitrap XL, Thermo Fisher Scientific, MA) for nontargeted identification. We then identified the metabolites using METLIN, Human Metabolome DataBase, Lipid MAPS, MassBank, and Kyoto Encyclopedia of Genes and Genomes. In addition, the tandem mass spectrometry (MS/MS) spectra of metabolites were conducted using MS Frontier software to confirm the identification of metabolites.
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